Penaeus monodon (black tiger shrimp): 119577939
Help
Entry
119577939 CDS
T08784
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119577939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119577939
03110 Chaperones and folding catalysts [BR:
pmoo03110
]
119577939
04121 Ubiquitin system [BR:
pmoo04121
]
119577939
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
119577939
Spliceosome [BR:
pmoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119577939
Complex C
U4/U6.U5 tri-SnRNP related factors
119577939
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
119577939
Chaperones and folding catalysts [BR:
pmoo03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
119577939
Ubiquitin system [BR:
pmoo04121
]
Ubiquitin ligases (E3)
U-box type E3
119577939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
dCache_2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
119577939
NCBI-ProteinID:
XP_037781554
LinkDB
All DBs
Position
10:22747495..22759065
Genome browser
AA seq
519 aa
AA seq
DB search
MGKRQHQKDKMYLTSTEWSTLYGGYKKSSHSGARAEFRRLPLTHCALSLLPFNHPYIDPK
GNVFDLEAILPFLKKFKVNPVTGEPLSEKDLIKVTFHRASTGEYHCPVLYKPLTNTSHVV
AVKTTGNVFCYEAIEQLNIKVNNWRELLTDKPFTRNDLIIIQDSQNLTKFNISKFHHVIK
NLRVEDEETVKARSDASMRLKNVSRDTQQILEEFNKTYKDDGPKEETGERVADKFNAAHY
STGKVAASFTSTSVDVETKQEAAVLEDDVVRYQRVKKKGYVSLKTNLGTLNLEVYCDTVP
KASENFIRLCDRGYYKGTKFHRSIRHFMIQGGDPEGTGKGGESIWGKPFKDEFRPNLSHK
GRGVLSMANSGPDTNKSQFFITYRSCTHLDGKHSIFGRVVGGLSTLSGMEAIETDNKDVP
IEDIIIKETTVFVDPFKEADVELAEERRLDIEKRKAEEDELKNRKRPKVVEDQFKMFRSG
VGKFLDLGKSSVSKEDLQTSSQQKKKKDATYGFKDFSIF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagacaacatcagaaggataaaatgtacttaacctccacagagtggtcaaca
ctctatggaggttacaaaaaatcatcacactctggagcccgagcagaattcagacgattg
ccactcactcattgtgctctgtcgctgttgcccttcaaccacccatacattgatccaaag
ggaaatgtttttgatcttgaggcaatcctgcctttccttaagaaattcaaagtgaatcca
gtcactggagagccattgagcgaaaaggacctgataaaagttacttttcaccgagcaagt
actggagaataccactgccctgtattgtacaagcccctcaccaacacctctcatgtggtt
gcagtcaaaacaactggcaatgtcttctgttatgaagccatagaacagttgaatattaaa
gtcaataattggagggagctcctcacagacaagcccttcacccgaaatgacttgattatc
atccaggattctcaaaacctgaccaagttcaacatcagcaagtttcatcatgtcataaag
aaccttagagtagaggatgaagagactgttaaagctcgttcagatgcatccatgagactg
aagaatgtttcacgagacactcagcagatcctggaagagttcaacaaaacgtacaaagat
gatggtccaaaggaggaaacaggagagcgagtagcagacaagtttaatgcggcacattat
tcaactgggaaagtagcagccagctttacctcaacatcagtagatgtggaaacaaaacaa
gaagcagcagtactagaagacgatgttgtcagatatcagagggttaaaaaaaagggctat
gtttccctcaagacaaatttgggtacattgaatctagaagtgtactgtgacactgttcca
aaagcctcggagaacttcataaggttatgtgatcgtggatattacaagggaacaaaattc
catagatcaattagacattttatgattcaaggaggagatccagaaggcacaggcaaaggt
ggagagtctatttggggaaaaccattcaaggacgaatttcggcccaacttgtcccataag
gggcgaggagtgctctctatggccaattcaggacctgacaccaacaaaagccaattcttt
attacgtatagatcctgtacccatcttgatggcaaacacagcatatttggccgagttgtg
ggtggtctttcaacattatcaggaatggaggctatagagacagacaacaaggatgttcca
attgaggacattatcatcaaggaaaccacagtatttgttgacccctttaaggaagcagat
gtggagcttgcagaagagaggcgacttgatatagagaaaagaaaggctgaagaagatgag
ctgaagaacagaaaacggccaaaggtagtggaagaccagttcaagatgtttcggtctgga
gttggcaagttccttgacctaggaaagtcatcagtttcaaaagaagaccttcaaacatca
tcacaacagaagaaaaagaaggatgcaacatatggctttaaggatttcagtattttctag
DBGET
integrated database retrieval system
