Penaeus monodon (black tiger shrimp): 119578819
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Entry
119578819 CDS
T08784
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03440
Homologous recombination
pmoo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119578819
03450 Non-homologous end-joining
119578819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoo03032
]
119578819
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119578819
DNA replication proteins [BR:
pmoo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
119578819
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
119578819
BRCA1-C complex
119578819
NHEJ (non-homologous end-joining)
MRX complex
119578819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
Rad50_zn_hook
GAS
SMC_N
Trimer_CC
FapA
AAA_29
AAA_21
ABC_tran
Zf_2nd_IFT121
AAA_13
Motif
Other DBs
NCBI-GeneID:
119578819
NCBI-ProteinID:
XP_037782379
LinkDB
All DBs
Position
11:complement(23241759..23258503)
Genome browser
AA seq
1205 aa
AA seq
DB search
MSKLEKMQIMGIRSFGPEEPRKIQFFSPLTLILGQNGCGKTTIIESLKYITTGDAPPGCG
KGASFVHDPKLAKEVTVRGQIKLMLKDTKGATLVTTRSLEATQKLKKIECKTIDATLQRR
RPDGSTDAISSKCADFEAEISNALGVSKPILNNVIFCHQEESNWPLDEGKKVKEKFDAIF
NATKYIKCLDTIRKLRAEMKTKVKNMHEVIDGLRKWRDEANRKRDDLKASCEQQNKIKVQ
KSKLKEELEPIRERLKEICDLEENVGRLNGELIGEKHKLEALRQSQADLRATLLEQLDCS
DEELHRMIQDFQRNLENMEEEQEKVMSRMQSIQREKEKNQAEMSRTERLRGEYEAAYKTQ
QDYLKERNRRMSSITKEFSFAEFMGVEDFSEQQAQSLLSKLLKVVEEERKKIAEKKEEYE
RKEQAVQKEIDGLRTSEAALDHDIKTKGKQLDETGKKIRQLKQTLMRNESDLSDMDLDSL
KVELTQVEDMIAKEESKVNLTELTAEIETAKKNKREGEHEVDEIKRVVAKMNRQANARSQ
YDIHMKEKKELENKIEFLKRKHADEFEHLLEAIPDDNIKNKVDACADSLRRRVTELRQEI
EGLNKRRTQLSMSIKGQKQQQSRKEQEIRELESKIDNICDGMNLDEALEKSKEVKDNLTR
ERGDLSSSITVLNRFTAKLRQRDCCPLCHRDFPSKDEVNQLIEELEGKVISIPGKLEEVK
VKLDKQEKVHDQIIQLKPQRNLANSAKVELDKIRAQIEEEMKELAKVDSELESQKEMLDM
TQGDEEMARQIQPDVITIENNLRKVKQLKIQIDDLQATLGSSDGGMTMEEAVTRQSELED
KLRKLQAKVEELQERLQEHKDRLQGLKDRKLRLSTQELELKTKLQETEKLKEDISKLDEE
RNKLTEDIEKAQVDIAPFKFQITTKTSEKTKLMEEKDSWIDTQNNKVSTILETHRRANDL
HKNISAYISRREENQLKEIREKVSTLQEAASSLEAQKKTVDEQNRDIEKQLANQKQRKRN
LDDEKKIREKETEAKRVQKAIRNLEERIRGFDYDKLIDEKTELLQKSSRIDNQGGILDGR
LQEVNKSIQTLESELRRKEIRDAEKNYKQKFVEMKCTDVAADDLNKYYTVLDTAIMQFHS
DRMRTINSIIRELWRSTYRGNDIDYIEIQTDEAESQGADKRRTYNYRVVMVKNGTDMDMR
GLVCW
NT seq
3616 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagttggagaaaatgcaaattatgggtattcggagcttcggcccagaggaaccc
cggaaaattcagtttttttcacctctgacactgatcttgggtcaaaatggttgtggaaaa
acaactataattgagtcactgaaatacatcacaacaggtgatgctcctccaggctgtgga
aaaggagcatcatttgtccatgatccaaagttagcaaaggaagttactgtgcgtggtcag
atcaagttaatgctaaaagacacaaaaggagcaactcttgtaacaactcgctccttggaa
gccacacagaagctgaagaaaattgaatgtaagaccatagatgcaacattgcaaagaagg
aggccagatggcagtacagatgctatatctagtaagtgtgctgactttgaagcagaaata
tcaaatgccttgggtgtttcaaaacctatcctgaacaacgttatattttgtcaccaggag
gaatcaaattggcctctagatgaaggtaagaaggtgaaagaaaaatttgatgccatattc
aatgccactaaatacatcaaatgtcttgatacgatacgtaagctacgtgcggaaatgaaa
acaaaggtgaaaaacatgcatgaagtcattgacggcctcaggaagtggcgagatgaggca
aaccgaaagcgtgatgacttgaaggcatcttgtgagcagcaaaataaaattaaggttcaa
aagagtaaactgaaggaagaactggagccaattcgagaacgtctgaaggaaatctgtgac
ttggaagagaatgttggccgtttgaatggagagctgattggagagaagcataaacttgaa
gccctaaggcagagccaggcagacctgcgggcgacccttttggaacaattggactgttca
gacgaggagctgcaccgcatgatacaggattttcaaaggaacttagagaacatggaagag
gaacaggagaaggtaatgtctcggatgcaaagcattcagagagagaaggagaagaatcaa
gctgagatgtctaggacagaaagacttcgaggagaatatgaggcagcttacaaaacacag
caggattacctgaaggaacgaaacagacggatgtcaagcattaccaaggaattttccttt
gcagaatttatgggtgttgaagacttcagcgaacaacaagctcagtctcttttgtccaaa
ctcctcaaggttgttgaagaggaacgcaagaagattgcagagaagaaagaggagtatgaa
agaaaagaacaagctgtgcagaaggagattgatggattaagaacctctgaagctgccctg
gaccatgacattaagactaaaggaaagcagttagatgaaacaggcaagaagatccgccag
ctcaagcagacgttaatgcgtaatgagagtgatttgtcagacatggatttagactcgctg
aaggtggagctcacccaggtagaagatatgattgctaaggaagaatcaaaagtcaatttg
actgagcttactgcagagatagaaacggctaaaaagaacaaacgagaaggagagcatgag
gttgatgaaatcaaaagggtagtggcaaagatgaaccgccaggctaatgctcgatctcag
tatgacatccatatgaaggaaaagaaggagttagaaaataaaattgaatttttgaagcgc
aagcatgctgatgagtttgagcatctcctagaagctattcctgatgacaacattaagaat
aaagttgatgcttgtgcagatagtcttcgaaggcgtgttactgaacttcgacaagaaatt
gaaggactgaataagcgtagaacccaattgtccatgagcataaaaggacagaaacaacag
cagagtcgtaaagaacaggaaatcagagaactggagagcaaaatagacaacatctgtgat
ggtatgaatctagatgaggcccttgaaaagtcaaaggaagtgaaggacaatcttacacgt
gaacgaggagatctctccagttccatcactgttttaaatcgtttcactgccaagctccgt
cagagagactgctgtcctctctgtcacagagacttcccatcaaaagatgaagtcaatcaa
cttattgaggagcttgaaggaaaggtgattagtattccaggtaaattagaagaggtcaaa
gtaaaacttgataaacaagagaaggtccatgaccagataatacagcttaaaccccagaga
aacctggcaaacagtgccaaagtggaactagacaagatcagagctcagattgaagaggag
atgaaagagttggctaaagtagactcagaactggaatcccagaaagaaatgctggacatg
acacagggagatgaggaaatggctcgacagatccaaccagatgtgatcacaattgaaaac
aatttgagaaaggttaaacagcttaagattcaaattgatgatctccaggcaactttggga
agctcagatggaggaatgaccatggaagaggcagtgactcgacagagtgaactggaagat
aaacttcgcaagttgcaggccaaagttgaagaattgcaagaacggcttcaggaacacaag
gatcgtcttcaaggacttaaagaccgcaaattgagactttccacccaggaacttgagttg
aagaccaagcttcaggaaacagagaaactgaaggaagacatttctaaactagatgaggaa
cgcaacaagctcacagaggacatagaaaaggctcaagtggatatagccccctttaagttc
cagataacgaccaaaacttccgagaagacaaagctcatggaggaaaaagactcttggatt
gacacccagaataataaggtgagcacaatcctcgagacacacaggagggcaaatgattta
cacaagaatatcagtgcttatatttcaagaagggaagaaaaccagctgaaggaaattcgt
gagaaggtttctactctccaggaggctgcctcaagcctggaggcacaaaagaagactgtt
gatgaacaaaaccgtgatattgagaagcagcttgccaatcagaagcaaaggaaacgtaac
ttggatgatgaaaagaaaatccgtgagaaggagacagaagcaaagcgggtgcagaaagcg
attagaaatttggaggaacgtataaggggttttgactatgacaagctcatagatgaaaag
acagaactcctgcagaagtctagtagaatagacaatcaaggaggcattctggatggacgt
ctacaagaggtcaacaaaagtattcagacactggaaagtgagctgagaagaaaggagatt
cgagatgctgaaaagaattataagcagaagtttgtggaaatgaagtgcactgatgtagct
gcagatgatctaaacaaatactacacagttttagatacagccataatgcagttccactca
gataggatgcgcacaatcaacagcattatccgagaactttggcgttcaacttataggggc
aatgacattgactacattgagatccagacagatgaggcagagtctcaaggtgcagacaag
cgacgcacatacaattacagagttgtcatggtaaagaatggcacagatatggacatgcga
ggacttgtctgctggt
DBGET
integrated database retrieval system
