Penaeus monodon (black tiger shrimp): 119578833
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Entry
119578833 CDS
T08784
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119578833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119578833
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119578833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119578833
NCBI-ProteinID:
XP_037782397
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All DBs
Position
11:complement(23886232..23894161)
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AA seq
281 aa
AA seq
DB search
MAGTDRWRIPGPEKSFPYSLLQPKEDAAFLREDNMRRDGRSAVDHRQLFMSLGIISQAKG
SSYVELGNTKVCCGVYGPKDVQRGNDFKMSCQVICEVKMAPFSCPVRKPPQPDRQQKEMS
RQLKEALETVIILDKFPKSQIDVYVTVIEDDGGLLAACITAAGLALCHASIDVYDLIVGS
SVLWHSGILYVDPSRQEEEFEGSETRSSGREGGHLTIGMMPNYANGQIALTLQEGQMAVD
NICEGLEIAVDTCQRIYTLSRKTLMDHVQSVLDEDDEAATS
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcactgaccgatggcgtattccaggaccagaaaagagttttccatattcctta
ctgcagccaaaggaagatgcagcttttttaagagaggataatatgcgcagagatggacgc
tcagcagttgatcacagacagttgtttatgagtcttggcattattagccaggccaaaggg
tcctcatatgtggaattaggaaacacaaaagtttgctgtggagtatatgggcctaaggat
gtccagagaggaaatgacttcaaaatgtcatgtcaggtcatatgtgaggtgaaaatggcc
ccattttcttgtccagtcagaaaacctccacagcctgacagacagcagaaagaaatgagc
aggcagttgaaagaggcattggaaactgttattattttggacaagttccccaaatcccag
atagatgtgtatgttactgtaatagaagatgatggtgggcttttggcggcttgtattaca
gcagcaggccttgccttgtgccatgcaagcattgatgtctatgatctgattgtaggatca
tcagtgctctggcactcaggcatcttatatgtggacccgtctcggcaggaggaggaattt
gaagggagtgaaactcgtagttccggtagagaagggggacacttaaccattggaatgatg
ccaaattatgcaaatggacagatagcactaacactgcaagagggccagatggcagttgat
aacatctgtgagggacttgagatagcagttgacacatgccagaggatttatacactgtcc
agaaagacattgatggatcatgttcaatcagttcttgatgaagatgatgaagcagcaaca
tcatag
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