Penaeus monodon (black tiger shrimp): 119578912
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Entry
119578912 CDS
T08784
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119578912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119578912
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119578912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
119578912
NCBI-ProteinID:
XP_037782511
LinkDB
All DBs
Position
11:complement(30919718..30928380)
Genome browser
AA seq
928 aa
AA seq
DB search
MASVQPKEQLVLDGAHEQGFIAFYKGLPEKPNTTVRLFDRGEYYTVHGQDAVLAARELFR
TNSVIKHLGGGSNKLESVVLSRLNFESFVRDLLLLKHYRVELYKQKSSSKNDWEAEYKAS
PGNLSQFEEILFGANNELTVTTGVIGVKLASEGGHRVVGVGYIDANGRQMSVAEFNDNDT
FSNLEALVVQLSPRECLIPSGDLGPDGAKLKQVLSRSQLLVSERKRTEFTNKDASQDLSR
LLRTKGDASAVAARPEMDRTNAICALAAVIKYLELLGDDSNFAQYTLSMYDLSQYMRLDS
AAVRALHVEPISGSVESSGGVSKTHTLLGLLDKCRTPLGHRLLAQWLRQPLVDINKIEER
LDLVEAMVCTVEMRHSLGEEHLRRVPDLNRMARKLSRKAATLQDCYRLYQCIERLPYLCE
AIAKYDGPHTASLAAVFTTPLQELITDLAKYQEMIETTVDMEQANQGEYVIKPDFDETLA
ELRETMNGLEKDIQNQLRKAANDLCLEAGKSIKLESNAQLGFYFRVTLKEEKVLRNNRSY
HMIDTNKAGVRFRNNALQDLNEQHMASKEEYAQQQKTVVEEIMNIAVGYVEVMQNLGQVL
ATLDCIFALATAAVSAPIPYVRPKLLEQGSGVIKLQEIRHPCLELQDDVSFIPNDCTFDK
DNGLFHIITGPNMGGKSTYLRSVGAAVLMAQIGSFVACQEAEISIVDSILARVGAGDCQL
KGVSTFMAEMLETATILRSASNKSLIIIDELGRGTSTYDGFGLAWAISEYIAKEIAAFCL
FATHFHELTALADEVDSVQNYHVTATTAHGALTLLYQVRPGPCDRSFGIHVAELANFPSS
VIEYAKRKAGELEDDFGNDDDDSEEAVKKRKLEKQEGEKLIEEFLTKAASLDVDSMNEQD
LETEINKLRDEVKGKNNAYVSRLLSREI
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgttcagcccaaggagcagctcgtcctagatggcgcccacgagcaaggattc
atcgccttttataagggtcttccggagaaaccaaacaccactgttcgcctgtttgaccgt
ggggagtactacacagtccacggccaagatgcagtgctggcagcaagggagctattccgc
actaattctgtcatcaagcacctgggtggaggaagtaacaaattagagtcggttgtttta
agtcgcctgaattttgaatcttttgttcgtgatctcctcctgttgaagcattatagagtg
gaactctataagcagaagtcctcaagcaagaatgactgggaagctgaatataaggcatct
ccaggaaatctttcacagtttgaggagattctgtttggtgcaaataatgaactcacagtc
acaacaggtgtcattggagtcaaattagcaagtgaaggtggccatagggttgtgggtgtt
ggttacattgatgccaatggacgccagatgagtgttgcagagttcaatgataatgataca
ttcagcaacctggaagcccttgtggttcagcttagcccaagagaatgtcttatcccctct
ggtgatctgggacctgatggagccaaactaaaacaggtgttatctcgcagccaactcctt
gtttctgaaagaaaaagaacagaattcaccaataaggatgcaagtcaagaccttagtcgg
cttctgcgcactaagggagatgcatctgctgttgctgcaagaccagaaatggaccgcaca
aatgccatatgtgcactagcagctgtcataaaatatttagagcttctgggcgatgatagt
aactttgcccagtatactctttctatgtatgacctcagtcagtacatgcgtcttgacagt
gcagctgttagggcattgcatgtagagcctatcagtggtagtgttgagtcttctggcggt
gtgtctaagactcatactctccttgggctcttagacaagtgcagaactccacttggacat
cgtttactggcacagtggcttagacagcctttagttgacattaataaaattgaagagaga
ttagatttagtggaagccatggtatgcactgtagagatgcgtcacagtcttggtgaggaa
cacttgcgtcgtgtgcctgacctgaaccgcatggctcgcaagctaagtcgaaaggcagcc
actttacaagactgttacagactctaccagtgcattgagaggctaccatacctgtgtgaa
gcaatagccaagtatgatggaccacacacagcttcactagcagcagtcttcacaactcct
cttcaggagttaataacagacttagcaaagtatcaggagatgatagaaaccactgttgac
atggaacaagccaatcaaggagaatatgttatcaaacctgactttgatgagacattagca
gaattaagagaaactatgaatggcttagaaaaggatatccagaaccagttgaggaaggca
gccaatgacctctgtctggaggcagggaaaagcataaagctggagtctaatgcacagctt
ggcttttacttcagagtgacattaaaggaagagaaagtgctgcgaaataatcgaagctac
catatgattgatacaaacaaagcaggagtgaggtttagaaataatgcccttcaggacttg
aatgaacagcacatggcatcaaaggaagaatatgcacagcagcaaaaaacagtggttgag
gaaattatgaatattgcagttggctatgtggaggtaatgcaaaacttgggacaggtgctt
gctacattagactgcatttttgcccttgcaactgcagcagtatctgcccctattccctat
gtacggcccaaacttttggaacaaggatcaggtgtcataaagttacaggagatccgtcat
ccttgcctggagcttcaggatgatgtatcatttataccaaatgattgcacatttgacaaa
gataatggattgttccatataatcactggacccaacatgggaggtaaaagcacttatctg
cgctctgtgggtgctgccgtcttaatggctcagattgggtcttttgttgcttgtcaggaa
gcagaaatatccatcgtagacagtattctagctcgggttggtgcaggggattgtcagctt
aagggtgtgtcaacatttatggcagagatgctcgagacagcaactattttaagatctgct
agcaacaaatcactgatcatcattgatgaactgggacgtgggacatcaacttatgatggc
tttgggctagcatgggccatatcagagtatattgcaaaggagattgcagcattctgcctc
tttgctacacatttccatgagctcacagcattggcagacgaagtggacagtgttcagaat
taccatgtgacagccacaactgcacatggtgctttgactcttttataccaggtaagacct
ggaccttgtgaccgtagctttggaatccacgttgcagagctggccaacttcccatcaagt
gtgattgagtatgccaaaagaaaagctggggaactagaagatgactttggtaatgatgat
gatgattcagaggaagcagtcaaaaagaggaaattagagaaacaagaaggggaaaagctg
attgaagagttccttaccaaggcagcttcactagatgttgatagtatgaatgagcaagac
cttgagaccgagatcaacaaattgcgtgatgaagtcaaaggaaaaaacaatgcctatgta
tcccggttattgtcacgggagatttaa
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