Penaeus monodon (black tiger shrimp): 119579361
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Entry
119579361 CDS
T08784
Name
(RefSeq) pre-mRNA-splicing factor syf2-like isoform X1
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119579361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119579361
Spliceosome [BR:
pmoo03041
]
Complex B
Other components
Prp19-related factors
119579361
Complex C
119579361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Ribosomal_S30AE
Motif
Other DBs
NCBI-GeneID:
119579361
NCBI-ProteinID:
XP_037783053
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All DBs
Position
12:complement(20083623..20118561)
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AA seq
245 aa
AA seq
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MAQVCSVIYCSSRCSAMSMTLSSAGSSSSKIADFKARLAKLHTKRNEAAALNHKEVVEED
RQKQMPKNYAKKRERLEAEFEEEQRREAVMAQGKDYDRLKMLEVGADEAERWERRKKKKN
PDQGFSTYEDATIRQYNRLVKNRKIDLEEYEREKEAVGEDAFYGRDNTIAIGLHKDSKEA
IDGMVDDLEKQISKREKYSRRRIYDDDADINFINERNMKFNKKLERFYGDYTEEIKQNLE
RGTAV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggtttgttctgtgatttactgtagttcgcgttgcagtgccatgagtatgaca
ttgagcagtgctggaagctctagtagcaaaattgctgattttaaggctcgcttagcaaag
ctgcacacgaagaggaatgaggcagcagccctgaaccacaaagaagttgttgaagaagat
cgtcagaaacagatgcccaaaaactatgcaaagaaaagagaacgattagaagcagaattt
gaagaagagcagcgtagagaagctgttatggcgcagggtaaagactatgaccgtctcaag
atgttggaagttggagcggatgaagctgaacgttgggagagaagaaagaagaaaaaaaac
ccagaccaaggtttctctacctatgaagatgctacaattagacagtacaaccgtttggta
aagaacaggaagatagacttagaagaatatgaaagagaaaaagaggcagtgggggaagat
gcattctatggaagggacaacactatagctattgggcttcacaaggattccaaagaagct
attgatggtatggtagatgatctagagaaacagatttctaagcgagagaaatactcacgc
cgccgtatctacgatgatgatgctgacatcaactttatcaatgagcgtaacatgaagttc
aacaagaagctggagagattctatggtgactacactgaggaaatcaagcagaatctagaa
cgtggaactgctgtgtaa
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