Penaeus monodon (black tiger shrimp): 119579388
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Entry
119579388 CDS
T08784
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119579388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119579388
03012 Translation factors [BR:
pmoo03012
]
119579388
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119579388
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119579388
Translation factors [BR:
pmoo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119579388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
AAA_14
AAA_16
NPHP3_N
ABC_tran
NACHT
TsaE
AAA_23
Motif
Other DBs
NCBI-GeneID:
119579388
NCBI-ProteinID:
XP_037783105
LinkDB
All DBs
Position
12:29633214..29660044
Genome browser
AA seq
1060 aa
AA seq
DB search
MYGRREGRGGYRDGGGDGGGWRGESGGGWGGGRGRGRGGGGGRGRGGGGGGRGRGERPPP
HLKGREIGMWYAQRSKDRQEKDVNLLPTLSMDASQVRNVGRMLDSLDEKDYSSRGTKRPE
HRAGASYQPEPDDDLSDEWDKRISSIVKKEFKDDDNTDVAGSSSGGADSFSDPDAWIQDN
TQKRKISAGQEQEKRQRSDAFAQRLDNMKESDFKQAYMANVHGNQMRDASGLSALKRDQM
GLVRKEAVDEKLYEDMMQQQNCPKYQKMLEVRKKLPSYKMRDEIVDTVRDNQVVVISGET
GCGKTTQVAQFLLEDAVADGQGSTCSIVCTQPRRISAISVAQRVADERGENLGKSVGYQI
RLEATHPRSEGSILFCTTGIVLQWLQSDPLLSKVSHLVLDEIHERDMLSDFIIAIAKDLI
KVRSDLKVILMSATLNAELFSEYFGGCPMLHIPGFTFPVKEFYLEDVIEMTRFKFEDERE
APIWVRKSNKHKDNEFEGMIAPYIRNLERSGKYSCHTLDELYKTTSEKLNLDLVLELLRA
ISRKEPGAVLVFLPGWADISKLHTLIQGDRSFSRSSHLVIPLHSLMPSVNQREVFSRPPP
GVRKIVLATNIAETSITIDDIVYVINAGRIKMKNYDKEANLVTLLPEWVTLANARQRRGR
AGRVQDGVCYHLYTRAREKLLDDYPLPEIQRTRLEEIILHVKILRLGSAKPFLAKLMMPP
DPSVVDKSLEMLQAINALDESENLTPLGFHLARLPVDPLTGRMLLMAAIFSCVGPILTIA
SALSFKDPFSVPLGKERIVDEIKKKMSRGTKSDHLMLVNVYDGWEDAWRHREAREYCWDN
FLSSAVLEQLRNMRRQFMGLLYEHKFVNSKDPQAAEANRNSDNIALVRAIITSGLYPNVA
RVLPQRGRPNPHKPRSIRTQYERRVSLHPKSVNEKEREYESPWLMYREKIKSSKVYIHDS
SMVPNYPLLFFGRKLNYVDGVINVDDFVRVRCSRHVAHLVQSLRTQLDELLEYKISHPGV
TRWNKSSKEGALLHTIVDLISSEKISSSQDNNDYYDDGDD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggaggcgtgaaggaagaggaggctaccgtgatggtggtggagatggtggtggt
tggagaggagaaagtggtggaggatggggaggaggtcgaggaagaggaagaggtggagga
ggaggcagaggaagaggaggtggggggggaggaagaggccgaggggaacgacctccacca
cacttaaaaggcagagaaataggcatgtggtatgctcagcgctcaaaagatcgccaagaa
aaagatgtgaatcttttacccacattgtccatggatgctagtcaagtacggaatgttggc
cgaatgctggactcccttgatgagaaagattactctagcagaggtacaaagagaccagag
catagggctggtgcaagttaccagccggagccagatgatgacctcagtgatgagtgggac
aaacgtatatcatctatcgtgaagaaggaatttaaagatgatgacaacactgatgttgct
ggtagcagctcaggaggtgcagattctttctcagatccagatgcttggattcaagacaac
actcagaaacgtaagatttcagcaggccaagaacaggagaagaggcagcgcagtgatgcc
tttgcacagaggctagataacatgaaggagtctgacttcaagcaggcttacatggctaat
gtccatgggaatcagatgcgtgatgcaagcggtttgtcggctttaaagagagatcagatg
ggccttgtgaggaaagaggcagtggatgaaaagctttatgaagacatgatgcaacaacag
aattgtccaaagtatcagaaaatgttagaagtgcgtaagaagcttccatcatataagatg
cgggatgaaattgtagatactgttcgagataatcaagttgtagttataagtggagaaaca
ggatgtggtaaaactacacaggttgctcagtttttgctggaagatgcagtcgctgatgga
caaggatctacttgcagtattgtttgcacccaaccaaggcgtatatcagcgatatctgtt
gctcaaagggttgcagatgaacgtggagagaatctaggcaagagtgttgggtaccagata
aggcttgaagccactcatcctcgatctgaaggctccatcctgttctgtaccactggtatt
gtccttcagtggctacagagtgatcccctccttagtaaagtgtctcacctggttcttgat
gaaattcacgagagagatatgttgtcagacttcattattgcaattgcaaaggaccttatc
aaagtaagatccgatctgaaggtaattttaatgagtgcaacgctgaatgcagaacttttt
tctgaatattttggtggctgtcccatgctgcatattcctggttttacatttccagtaaag
gagttttatcttgaagatgttatagaaatgacaagattcaagtttgaagatgaacgagaa
gcaccaatatgggtgagaaaaagcaataaacataaggataatgaatttgaaggcatgata
gcaccttacatcagaaacttagaaaggagtggaaagtactcctgccacaccctagatgaa
ctgtacaagacgacaagtgaaaagcttaatttggacctggtgcttgagttacttcgtgcc
atcagccgtaaagagcccggagctgtgcttgtgttcctcccaggttgggcggatatttcc
aaactacacacactcatacaaggcgacagaagtttctctagaagtagtcatttggtaatc
cctctccactctctcatgccctctgttaaccagcgagaagtgttcagtagaccacctcca
ggtgtacgcaagattgttttagctacaaacatagctgaaactagtataactatagatgat
attgtgtacgtgataaatgctggacgtatcaagatgaaaaattatgataaagaagctaac
ttggtgacgctgctgcctgaatgggtcactcttgctaatgccaggcaaagacgaggcaga
gctggtcgtgtgcaagacggtgtctgttaccacctgtatacacgagcccgagaaaagttg
ttggatgactaccctctgccagaaattcagcgtacgcggcttgaggaaatcattctgcac
gtgaagatcctgcgcttagggtctgccaaaccgttcttggcaaagctcatgatgccacca
gatccaagtgtggttgataaatctttggagatgcttcaagctattaatgccctggatgag
agtgagaatttaactccattaggtttccacttggcacgcttgcctgtggatcctttgact
gggcgaatgctactcatggcggcgatattctcctgtgtggggcccatactgactattgcc
tccgcactctcatttaaagatcctttctcagttcctttgggaaaagaacgtattgtagat
gagataaaaaagaaaatgagtcgtggcacaaagagtgatcatttgatgctagttaatgtg
tatgatggatgggaggacgcgtggcgccacagagaagcaagggagtattgctgggacaac
ttcttatccagtgctgtgctagaacagctgaggaacatgaggcgacaatttatgggtctc
ctttatgagcacaaatttgtgaattctaaggatccgcaagcagctgaagccaatcggaac
tctgacaatattgcccttgttcgcgccatcatcacaagtggtctgtatccaaacgttgct
cgtgttcttcctcaaagaggacgccccaacccacacaaaccccgtagcatccgcacacag
tacgagcgcagagtatcattacatcccaagtctgtaaatgagaaggagagggaatatgaa
tcaccttggctcatgtaccgagaaaagatcaagtcttccaaggtctacatacatgacagt
tcaatggttcccaactacccattactgttctttggccggaagttgaactatgttgatggc
gttatcaatgttgatgacttcgtaagggttcgctgctcacgacatgttgcacatttagta
cagagtttaagaactcagctggatgaacttctagaatataagattagccatcctggtgtt
accagatggaataaatcaagcaaagaaggagcacttctgcacaccattgtagatctcatc
tctagtgagaaaatttcctcctcacaggacaacaatgactattatgatgatggagatgat
tag
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