Penaeus monodon (black tiger shrimp): 119580179
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Entry
119580179 CDS
T08784
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03018
RNA degradation
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119580179
09123 Folding, sorting and degradation
03018 RNA degradation
119580179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119580179
03041 Spliceosome [BR:
pmoo03041
]
119580179
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119580179
mRNA degradation factors
5'-3' decay
Lsm complex
119580179
Spliceosome [BR:
pmoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119580179
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM14
KOW7_SPT5
SM-ATX
Motif
Other DBs
NCBI-GeneID:
119580179
NCBI-ProteinID:
XP_037784100
LinkDB
All DBs
Position
2:complement(<3224483..3228592)
Genome browser
AA seq
88 aa
AA seq
DB search
MAASNPSTLLPLELVDKCIGSRIHIIMKSDKEIVGTLLGFDDFVNMVLEDVTEYESTPEG
RRITQLDQILLNGNHITMLVPGGAEMVD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcaaatccctcaacacttcttcctctcgagttggtggacaaatgcattggc
tcacgcatccacatcatcatgaagagtgacaaggagattgttggaactctcttgggcttt
gacgactttgttaacatggtgctggaggatgtgactgaatacgagagcacaccagagggc
agaagaatcacgcagttggatcagatcctcctgaatggaaatcacataactatgcttgtt
cctggaggtgcggaaatggtcgactag
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