Penaeus monodon (black tiger shrimp): 119580334
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Entry
119580334 CDS
T08784
Name
(RefSeq) transcription factor Sox-2-like isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoo03000
]
119580334
Transcription factors [BR:
pmoo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119580334
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Vir1p
Motif
Other DBs
NCBI-GeneID:
119580334
NCBI-ProteinID:
XP_037784354
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Position
13:complement(41237400..41272785)
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AA seq
441 aa
AA seq
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MLTLDPPDLKGGSLHSAHLPPHSSHSHSVPHTVSHAHHNSHSHTYSLSHHSSLTSLNSSL
SSSLTSPSLASVGSMSAHSPPQTHVPTPTNNNNSSTNNNNNGSSTNSSSNSTSNSKSNAS
SSSAAAERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFID
EAKRLRAVHMKEHPDYKYRPRRKTKTLMKKDKYPLASGLLPTDPTRPPVQQVTRDMYNMT
NGYMPNGDYGDYGEWRYGYDSAAYGGQGYPYMTGQVYGGYDMTRGYSPTSTSTPSYMNGS
YSSAMYASAPSPYSMSQMASMASVGSVGSVGSSASHSPTPIKSETPTLPVSSPGASMPPS
ASHTTPGDYPTGVMKREYAPGQPGQQDLSQMISMYLPGSQERHEQQKAAAAAAYMSHAHY
HAHAATSPEQMPPAPMPLTHM
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccctcgaccctcccgacctcaagggcgggagcttacactccgcacacctccct
ccccactcctcccactcccattccgttccccacactgtgtcccacgcccaccacaactcc
cactcccacacatactccctgtcccaccattcctcgttgacgtcgctcaattcgtccctc
agttcgtccctgacgagcccctccctggcctccgtgggcagcatgagcgcccactcgccg
ccccagacacacgtcccaacccccaccaacaacaacaacagcagcacaaacaacaacaac
aacggctcctccaccaacagctctagcaacagcaccagcaacagcaagagcaacgcgtcc
tcctcgagcgccgccgccgagcgcgtcaagcggcccatgaacgccttcatggtgtggtcg
agaggccagagacgcaagatggcccaggagaaccccaagatgcacaactcggagatctcg
aagcgcctcggggccgagtggaagctgctgtcggagacggagaagcggccgttcatcgac
gaggccaagagactgcgcgccgtccacatgaaggaacacccagactacaagtacagacct
cggcggaagacaaagaccctaatgaagaaagacaagtaccccctcgcttccggcctgctc
cccacggaccccacccggccccccgtgcagcaagtgacccgagatatgtacaacatgacc
aacgggtacatgccgaatggagattacggggactatggtgagtggcgctacggctacgac
agcgctgcgtatggaggccagggctacccgtacatgacaggccaggtctacggtggctat
gacatgacccgcggctactctccgacctcgaccagcaccccctcctacatgaatgggtcg
tacagttcagctatgtacgcctctgcaccgtcgccctattccatgagtcaaatggcttcc
atggcatccgtgggttcggtcgggtccgtgggctcctctgcgtcccattcccccacgccc
ataaagtctgagacgcccaccctcccagtgtcgtcccctggagcctccatgccaccctca
gccagccacaccactccaggtgattatccaacgggtgtgatgaagcgggagtacgcgccg
ggccagccagggcagcaggacctgtcgcagatgatctccatgtacctgccggggtcccag
gagcgccatgagcagcagaaggccgccgccgccgccgcctacatgtcccacgcacactac
cacgcccacgccgcgacttcccccgagcagatgccgcccgcacccatgcctctcacccac
atgtaa
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