Penaeus monodon (black tiger shrimp): 119580388
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Entry
119580388 CDS
T08784
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119580388
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pmoo00535
]
119580388
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119580388
Meiosis-specific proteins
Cohesin complex and associated proteins
119580388
Proteoglycans [BR:
pmoo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119580388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
Fez1
AAA_29
CCDC39
Motif
Other DBs
NCBI-GeneID:
119580388
NCBI-ProteinID:
XP_037784441
LinkDB
All DBs
Position
13:complement(47171813..47194922)
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AA seq
1200 aa
AA seq
DB search
MYIRQIIIQGFKSYREQTVIDPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFSHLRAEQ
RQALLHEGTGPRVISAFVEIIFDNQDGRIPIDKNEVCLRRVIGAKKDQYFLNRKAVTKLD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSHRLKLLREVAGTRVYDERREESKEILR
ETESKREKIEEFLRTIEDRLKTLEEEKEELKEYQKYDKMRRALEYTIHDRELKETRKKLD
DMENQRKNSGAEQEKLRQQLQKAQDAIKTSSKEMKDIKQKLGQVKEERDTFNMEQQQLLK
EKTKLEFTIKDLADEVQGDNKSKERAEKELQKLRSTISQKEAELEAIRPQYEEMKAREDE
AQRELSLKDQKRKELYAKQGRGSQFTSKEQRDQWIQKELRSLNKAVKSKQDQIQRLEDEI
SRDSERRVQLDKKVEELSADTEDYRQSIDEHNKVFYEMKKRKDQLQSERNEHWRKENNLQ
QNVSTLKEELSRADQSLRSMAGKPILNGRDSVQKVLDTFRERGGHLGEIATQYYGLLIEN
FECERSIYTAVEVTAGNKLFHHIVESDKIGTQILKEMNKQKLPGEVTFMPLNRLTVKDID
YPQTNDAIPMVSKLTYSDRYLKALKYIFGRTLICRNLEVATHLARSTRLDCVTLDGDQVS
SKGSLTGGYFNTSRSRLEIQKARSELRDQITSAETELRTLQDTLRNTEQEINKIVSEMQK
TEIKNSKAKNLFEKVKTDIRLMKEELSGLERTKQPKERSLSQLKANLEAMMATKEGLESE
LHQDLMATLSVQDQREVDQLNDDIRRLTQENKEAFTRRMKLEADKNKLENLLTNNLHRRK
DELVQALQEISVEDRKRQLEHSQSEIQRVDSRIEEVAVQFKEVEKKVVEHQKKEKSLKAE
LEKLKLKEKEVMERMEEDAKDLEKMASKQNLLHQKIDECTKKIRDLGSLPSDAFDKYQNL
ATKQLFKKLETANTELKKYSHVNKKALDQFISFSEQKEKLVSRKEELDRGYDKIKELMSV
LEHRKYEAIQFTFKQVSKYFSEVFKKLAPQGHAQLVMKSDQDEESEQEEQGTVDNFTGVG
IRVSFTGRNAEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAV
ADMIHELSKDAQFITTTFRPELLEHANKFYGVKFRNKVSHVECVSREEAYDFVEDDQTHG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcagacagattattattcaaggttttaagagctacagggaacagacggttatt
gatccatttgacccacggcacaatgtagtcgttgggcgaaatggatcgggaaagagtaac
ttcttctatgctattcagtttgtgttgagcgatgagttctcacatttgcgtgcagagcag
cgccaggccctcctccacgagggtactggccctcgcgtcatctctgcttttgtggagata
atcttcgacaatcaggatggcagaatacccattgacaaaaatgaggtatgcctccgtcgt
gtcatcggggcaaagaaggatcagtacttccttaacaggaaggctgtcacgaagcttgat
gtcatgaacctcctggagtcagctggtttctctcgctctaatccctactacatcgtcaaa
cagggtaaaatcaaccaaatggcaacagcacctgattcgcacagattgaagctcttgaga
gaggttgctggaacacgtgtgtatgatgagagaagagaagaatccaaagaaattttaaga
gaaactgaaagtaaacgagaaaagattgaagaatttttaagaactattgaggatagatta
aagaccctagaggaggaaaaggaagagcttaaggagtaccagaagtatgataagatgcga
agggcccttgagtacaccatacacgacagagagttaaaggaaaccagaaaaaagttggat
gatatggagaatcaacggaaaaactctggtgcagaacaagagaagttaagacagcagttg
cagaaagctcaagatgctatcaaaacatcttccaaagaaatgaaagatatcaaacaaaag
ctaggacaagtcaaggaggagagagacaccttcaatatggaacagcagcagttgttaaaa
gaaaagactaaattggaatttacaataaaagatttagcagacgaagtacaaggtgataac
aaatccaaagaaagagccgagaaagagttacaaaaactgcgctcaactatatctcagaaa
gaagctgaactagaagccatcagacctcagtatgaagagatgaaagctagggaagatgag
gcacagcgagagttatccttaaaagaccagaagcgcaaggaactgtatgcaaagcaaggt
agagggagccagttcacatcaaaggagcagcgtgaccagtggatccaaaaggaattaagg
tctctcaacaaggccgtgaagtctaagcaggaccaaattcaacggctggaagatgaaatt
tcgcgtgattctgaacggagagtacaacttgataagaaagttgaggaactctctgcagac
acagaggactaccgacagagtattgatgagcacaataaagtcttttatgagatgaagaag
agaaaagaccagttacagagtgagagaaatgagcactggcgcaaggagaacaatcttcag
cagaatgtgagcactctgaaggaggaactgtcaagagcagaccagtcgcttcgatctatg
gcaggcaagcccattttaaatgggcgagacagtgtacaaaaggtgctagacacttttcgg
gaacgtggtggccatcttggggagattgccacacagtattatggtcttctgatcgagaac
tttgagtgtgagaggtccatttacacagctgtagaggtcacagctggcaacaaattattc
catcacattgtggagtcagataagattggcacacaaatcttaaaggagatgaacaaacaa
aagctacctggagaagtgacattcatgcctcttaacagattgacagtcaaggatattgat
tatccacaaacaaatgatgccattcccatggtgagcaagcttacctattcagaccggtac
ctcaaagcactaaagtacatctttggacgcaccctcatctgccgtaatcttgaggtggcc
acacatcttgcccgctcaactcgactggattgtgtgacacttgatggtgatcaggtatcc
agcaaaggttccttgactggcggctacttcaacacctcgagatcacgcctggaaatccag
aaggcgagatctgagttgcgggaccagatcacctcagcagaaacagagctcaggacatta
caggacacccttagaaacacagagcaggaaatcaacaagatagtgtctgaaatgcagaag
acagagatcaagaacagcaaagcaaagaatctctttgagaaagtgaaaacagacatccgt
ctaatgaaagaggagttgtctggcttagagcgcacaaagcagcccaaagagcggtctctg
tctcaactgaaggccaacttggaagccatgatggccaccaaggagggcctggaatcagag
cttcaccaggacctcatggccacccttagtgtccaggaccaacgtgaagttgatcagttg
aatgatgacatcagaagattgactcaggagaacaaagaggcctttacacggcgcatgaag
cttgaggctgacaaaaacaagctggagaacttgttgacaaataacctccacagaagaaaa
gatgaactcgtacaggccctccaagaaatctcggtagaggaccgcaaacgtcagctagag
catagtcaaagtgagatccagagagtggattcacgcatcgaggaagtagctgtccagttc
aaggaagtggagaagaaagtagtagaacatcagaaaaaggaaaagagtttgaaagctgag
cttgaaaaactgaaattaaaagaaaaggaagtaatggaacgtatggaagaggatgccaaa
gatttggaaaagatggcatccaagcagaatcttctccaccagaagattgatgagtgcact
aagaagatcagggaccttggctccttgccctctgatgcctttgacaaataccagaatcta
gcaacaaagcagctgttcaagaaactagagaccgcaaacacagaactcaagaaatactca
catgtcaacaaaaaggccttggaccagttcatatctttctctgagcagaaggaaaagctg
gtttctcggaaagaggaactggatagaggttatgataagatcaaggagttgatgagtgtc
ttagaacatcggaaatatgaagccatccagtttaccttcaagcaagtgtcaaagtacttc
agtgaggttttcaagaagcttgctccacagggacacgctcagcttgttatgaagtctgac
caagatgaagaaagcgagcaagaagaacagggtactgtagacaacttcactggtgtaggc
atcagggtgtccttcactggccggaatgcggagatgagagagatgaaccagttgtctgga
ggtcagaagtctcttgtggctctggctcttatcttcgccattcagaagtgtgaccctgcc
cccttctatctttttgatgaaattgatcaggcacttgatgctcaacacagaaaagcagtt
gctgacatgatccacgaactcagcaaggatgcacagttcatcaccacaactttcagacca
gagctgcttgagcatgctaacaaattctatggtgtaaagttcaggaacaaagtgtcccat
gtggagtgtgtctcgagagaagaggcgtatgactttgtggaagatgatcagacacatggt
taa
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