Penaeus monodon (black tiger shrimp): 119580398
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Entry
119580398 CDS
T08784
Name
(RefSeq) DDB1- and CUL4-associated factor 10-like
KO
K11802
DDB1- and CUL4-associated factor 10
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoo04121
]
119580398
Ubiquitin system [BR:
pmoo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119580398
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
119580398
NCBI-ProteinID:
XP_037784457
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All DBs
Position
13:47699525..47716420
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AA seq
721 aa
AA seq
DB search
MPKVKTGRIHGSYFPDYELRRRETGLGKTLGWDSGIRRSLYSSMIPSTFWDPIEHDPKTG
FTGHGGVFNLEFSPDGTYLVAACEQRAIMVFDPLSRRQIHYIPLAHENCVNGIKFLDSRV
FASCSDDHTVALWDVRNLKRRIRLLQGHSNWVKNIEYSAGDGILVTSGFDGKILGWDING
YTEDGLLSTELFSMQGLMRMRLSPDCSKLVMCTTGGYMVLVHNLSLEHLSEDLRNFKPNM
YRLMQLSNTPLPHATMFTNLFYRQRNRVEFISDFPPSNEAEVIHSLQVHPQGWCVLSRNT
SMEDSSEWSCVHDIQDLGVTACKDEDEDQDNHGDLEPYDDIPSTSETEAQNSSTFQNRPS
SANSSNNNSNSSTNSGSESGNVNGNLHLSLTFSPRVEIMLRHSPRDESDDGGGDGGGGGG
GELAGGAGPARSGSSGSNVNAFATASGGSGVRVVDGAGIAVGGSAGGGGGGGGGIDIQLR
FTSMDVFEALEHIRERREEQRIRQGRQRAARTDSEASSSSGNNENSSGFPQSSSSQSPSP
ALQHLGRNRTFSVHRGRDFDNARENLGSGRTAANIIDSRNAFYIRTGTGNHRALLLLRPL
ENYPRYNQTVDPNHKIAKNISRLTHYIEEPNVGRGFIKELCFNSDGRLICSPYAHGVRLM
MFDQNCSELSTCVQDIPQTLYAVSTNNCHKNCVVSTKFSPTHCLLVSGCLNGKIVWHQPV
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagtgaagacaggaaggatccacgggagttacttccccgactatgagctcagg
cggagggagacgggcctgggcaagaccctaggctgggactcgggcatcaggcggtccttg
tactcgtccatgatccccagcaccttctgggaccccattgagcacgaccccaagacagga
ttcacgggccatggcggcgtctttaacctcgagttctctccagacgggacttatctggtg
gcggcatgtgagcagcgagccatcatggtgtttgatcctctgtccagacgacagatccat
tatatacctttagctcacgagaattgtgtcaatggtatcaagttccttgactctcgcgtg
tttgcatcgtgtagtgacgaccacacggtagccctttgggatgtgcgaaaccttaagagg
cgcatccggctgctccaggggcacagcaattgggtgaaaaacattgaatattctgctggt
gacggcattttggtcacgtctggctttgatggcaagatacttggctgggatattaatggg
tacacagaggatggcctgctgtccacagaattgttcagcatgcaaggactcatgagaatg
cgcctaagtcccgattgcagcaagttggtcatgtgcaccactggcggctacatggtactc
gtgcacaacctcagtctggagcacctctcggaagatcttaggaactttaagcccaacatg
taccgcttgatgcagttgtcgaacactccgttaccccacgccaccatgttcacaaacctg
ttctacagacagcggaatagagtggagttcatctcagacttccctccctctaatgaggcg
gaggtcatccactctctgcaagttcatccacagggttggtgcgtgttgtccagaaataca
tccatggaagattcgtcagagtggagctgtgttcatgatatccaggacctaggagtgaca
gcttgcaaggatgaggatgaggatcaagacaaccatggagacctagaaccctatgatgac
attccctcaacaagtgagacagaagcacagaattcttcaacatttcagaatagaccaagc
agtgcaaacagtagtaataacaatagtaacagtagtacgaacagtggaagtgaaagtggc
aatgtaaatggaaacttacacttatcattgacgttcagcccaagggtggaaatcatgctg
cggcacagcccaagggatgagagtgatgatggcggtggtgatggaggcggaggtggtggg
ggagaattagcaggtggagctggtcctgccaggagtggcagcagtggtagtaatgtcaat
gccttcgcaacagcctctggtgggagtggagtgagagttgtagatggtgcaggaatagca
gttggtggtagtgcaggaggaggaggtggaggagggggaggcatagacatccagctacga
tttacatctatggatgtctttgaagccttagaacatataagggagcgccgtgaggaacaa
cggatacggcaaggaaggcagagagcagctcggactgattcagaggcctcctcgagtagt
ggaaacaatgaaaactcctctggtttcccccagtcctcatcctctcagtcaccatcacca
gccttacaacaccttggccgtaataggacctttagtgtgcacagaggtagagattttgac
aatgccagagaaaatttgggctcaggaaggactgcagccaatattatcgactctcgtaat
gcattttatatcagaactggtactggcaatcatagagctctattgcttcttcgacccttg
gagaattatcctcggtataatcagacggtggatccaaaccataagattgcaaagaatatt
tcacggctaactcattacatagaggaaccaaatgttggaagagggtttatcaaggagctg
tgcttcaactcagatgggcggcttatatgctccccatatgctcatggggtgcggctcatg
atgtttgaccagaactgttcagaactctccacatgtgtgcaagatattccccaaaccctg
tatgctgtatccaccaacaattgtcataaaaactgtgttgttagtaccaagttttctccc
acacattgccttctagtctcaggctgcctgaatggcaaaattgtgtggcatcagcctgtt
ctctag
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