Penaeus monodon (black tiger shrimp): 119580437
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Entry
119580437 CDS
T08784
Name
(RefSeq) zinc finger SWIM domain-containing protein 8-like isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoo04121
]
119580437
Ubiquitin system [BR:
pmoo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
119580437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_ZSWIM8
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
119580437
NCBI-ProteinID:
XP_037784513
LinkDB
All DBs
Position
2:complement(4586776..4618838)
Genome browser
AA seq
1958 aa
AA seq
DB search
MFDWEEGDRFSFEDSERFEEDSLCSWISEPESLVNNWRGWKRSDKIACLLYGRNRDQDGR
VHSLTEMCARTVAAHIPFEVVEQMMPPVPEQLQLLIAFWSFPENEEDIRLYSCLANGNAD
EFLRGENHYKHKSVHDPLQIGFHLSATVAPSASGTKGQFNVAVTFDRGRITTCNCTCSAN
ASWCSHVVAVCLHRIHQPNQVKLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPTAQR
LIDEILSSQTSDINTVSGAPDPTAGGSANEQMAWWLDESNLHENIHKILVKFCVPSPIVF
SDVNYLSSTAPPVAAEWSSLLRPLRGREPEGMWNLLSIVREMFKRNDRNAIPLLEIITEE
CLATEKILVWWVNTKVALHMGSSGHGGKNNMNSNSHGSQYACSSLCDEIVVLWRLAALNP
ALSPQEREQLIAKFKGWHLKVLEKVAKSKETGTNGGGGSNKRGTDVDVFPGFKPAIEPCY
LDWNDYPLPGVTYSHTASRYYCPVMRFRHDSRHESQAAPISAPHPRNPTSHAGPKRPSER
RVLISSGNAGDKENLGAGVSLASHRHSGHRSSSVSSEGFCDNDLGRDSDSPPDQRSPEQV
DSGQVSRQSSREDRPMGALGLAAAFDRSRDDRDKSSPDDGGAESDWSGVAEPSRNQRSRA
GSRGQRARDQNGADEYDVYVYNANLVGDGNSVSDCSGAERGAEIFNNLKKFEDPLEILFA
RAEGLHAHGHLQEASGLAVQLAHELLANPPNLMIELPPPPSKGKRKKVNPASHHLTCLAS
ATLSKCAFLCTVLAENPDHTHLAFQVAMFGLEMARPPASTKPLEVKLANQESDLVFLLKR
LLLGPLELAVIRDKAEKMRSGTLKSRGEALLPLMLASFLFDALVIAGNNKSTVGGQSYRQ
PQDEALGFDAAVAAIGMKANVCEADHPLLCEATRRQRGELALTLLTHYKDDQDRLARIMD
KLLDKEVHQMYKAPSLPTYYVNNVPNQQTSASGLENSEASSSIRVADSPAAGAVSSSPMP
GVAAAAAVAAAAAAAAPPILGTPPSAHPSNQVPAPVQQQQQTVQRDRHNAGGAEIEGSMA
GLSLSPSQPVGGARAKEGTSSARFVEGEEGESPSWEDDYKAWEEKCAGKQRKKRNQACTL
ETTSTGVEVKLNLADNSPTSGRCAAWIKSTGPGSDSGSSGNSSDSIVSSSSGDKISGLEA
NKPVESPPLGYPLVRPVPQPTPESTTTTHPRPQPTYGKGVRFKGKRAYPTVPNQPSEASA
YFMFELAKTVLNRAGGNISTSLFTQPSSSQNHRGPHRPLHMCAFQIGLYALGLHNCVSPN
WLSRTYSSHVSWITSQAVEIGSPAVSFLIDTWEGHLTPQEAASIADRASRGRDAATIKAA
AKLALSCLPHAHALNPNEIQRAIIQCKEQSDEMLESACFAVEGAAKGGGVYPEVLFSVAR
RWYELYEARTRHQARHQARTSGGQHAGDIPFEDPGAPHNLPLPPPPPLNPPTPPNQQQQQ
PPIPPMDAQSQPGLHPPVSVGMNGNGGAGALPGVAGYPVAAPPSSVPYALTGIPYQLGYN
YIQGLPTSVSCINPQMPMPMYIQPPGVPFSGAQGVSQPLMPPPSMQYFPPVSIPSTLPQK
ILTSKSIHDLAASRHYSIRQILDATPRFSKGTLPGAGGMGGGLPGGQQNLGPQPPPLGAG
PPPLPQQPPLIQGNTPPQQGFYPLPYSNAVGSGGVSTAGFIGAQPTALLSWVRAQGPHMV
QPSPHQPQLPPPPTSQPQQQVPGLVGGQQVNNNGSMNYLLSTYRVGMLALETLGRRVHDD
RPQAKYARNPPYGEDVKWLLGVAKKLGQQYLHQFCMCSVNSVVSPFVLQELSVESAQYLA
RHSPALFSQQLRSPILQPLVQKCQQMFIQCTHLKMYYITPTEYDEFISIIRAARSAFQMT
PGGMVQFNELLQALRRSKSCKKELWTRITNALQQPTPV
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattgggaggaaggggatcgtttctccttcgaggactcggagcgatttgaagag
gactcactatgtagctggatcagcgagcccgagtccctcgtcaacaattggaggggatgg
aagcgttcagataaaatcgcctgtctcttgtatggccgcaacagagatcaagatggcaga
gtacattctctcacagagatgtgtgcccgcacagtggcggcacacatcccttttgaagtg
gtcgaacagatgatgcctcctgtgccagagcagctacaacttcttattgcattctggagc
ttcccggaaaatgaggaggacattaggctctacagctgcctggccaacggcaatgccgat
gaatttctccgaggggaaaaccactacaaacacaagagcgtccatgatccgttgcagatt
ggattccatctaagtgctactgtagcaccatcagcttctgggacaaaggggcagttcaat
gtagcagtaacatttgacaggggtaggatcacaacatgtaattgtacatgctctgccaat
gcctcttggtgttcacatgtcgttgccgtctgcctccaccgtatccaccagcccaaccaa
gtgaaacttcgtgctcctgtgagcgagtcattgtcacggctacagagagatcagctacag
aaatttgctcagtacctcatcagtgaactgccacaacagatcctgccaacagcacagcgg
ctcattgatgaaatcctctctagtcaaacatctgatattaatacagtttcaggggcacca
gacccaactgctggtggatcagccaacgagcaaatggcctggtggctcgatgagagcaac
cttcacgagaatattcacaagatcctggtcaaattttgtgtgccatctcccattgttttt
agcgatgtcaactacctgagttcaacagccccaccagtggctgcagaatggtcatcctta
ttgagaccactgaggggaagggaacccgaaggcatgtggaaccttctctccatagtgagg
gaaatgtttaagcgaaatgaccgcaatgccattcccctcttggagatcattacagaggaa
tgcctggctacagaaaagattttggtttggtgggtaaatacaaaggttgccctacacatg
gggagttctggccatggtggtaagaacaacatgaactccaacagccatggaagccagtat
gcttgctcatctctctgtgatgaaattgttgttctatggcgtctggcagcacttaaccca
gctttgtcacctcaggagcgtgagcagcttattgccaagttcaaaggctggcatctcaag
gttttagagaaggttgctaagagcaaagaaacaggtacaaatggtggaggcggaagcaac
aagagaggcactgatgttgatgtattcccagggttcaagccagcaatagaaccttgttac
cttgactggaatgattaccctcttcctggagttacatattcccacacagcttctcgatat
tattgtcctgtcatgcggtttaggcatgattctcgacacgagtcacaagcagcacccatc
tctgcaccacacccaagaaatcctacatcacatgccgggccaaaacggccttcagagcgg
cgtgtgcttatcagttctggaaatgcaggtgacaaagagaacttgggtgctggtgtctct
ttagcgagtcatagacacagtggtcatcggagcagtagtgttagtagtgaaggcttttgc
gacaatgacctgggccgtgacagtgactctccaccagatcaaaggtcacctgaacaggtt
gactcaggccaggtgtcccgacagagctcaagagaagatcgtcccatgggagctctaggt
ctggcggcagcctttgatcgttcaagagacgatagagataagtcatctcctgatgatggt
ggagcagagtctgactggtctggtgttgcagaaccatccagaaaccagagaagccgggca
ggtagtagaggacagcgtgccagagaccaaaatggagcagatgaatatgacgtgtatgtg
tataatgctaatttagttggggatggaaatagtgtaagtgactgtagtggggctgaaaga
ggagcagaaattttcaataacctgaaaaagtttgaagatccccttgagatactatttgct
cgtgctgagggtttgcatgctcacggacatttacaagaagcctctggactggcagtacaa
ctagcacacgagcttctggctaaccctccaaacctcatgatcgagctaccaccaccaccc
agcaaagggaagcgtaagaaggtaaacccagcatcacaccatctgacttgtctagcctca
gccaccttgagtaaatgtgccttcctctgcactgtcctggcagaaaaccctgaccacaca
cacctggctttccaagttgccatgttcggtttagaaatggcacgacctccagcatccact
aagccattggaagtgaagctagccaaccaagaaagtgacttggttttcctcctgaagcgc
ctgcttctcggtccactagaattagcagtaatcagagataaggctgagaaaatgcgatca
ggcacactcaagtctcgtggcgaggctctcctgccattaatgcttgcttccttccttttt
gatgctctagtcattgctggaaataacaaaagtacagttggaggtcagagttaccgccag
ccacaagacgaagctctgggcttcgacgcagctgtggcagccattggcatgaaggccaat
gtgtgtgaggcagaccacccactcctctgtgaggccacaagaagacagagaggagagttg
gctctcacactgctgacacactataaggatgaccaagacagactagctcgtatcatggac
aagctgttagacaaagaggtgcaccaaatgtataaagcaccttcactgcccacatactac
gtgaacaatgtgcccaatcagcaaacaagtgctagtggccttgagaatagtgaggcaagt
agcagcattagagtagctgattctccagcagcaggggcagtcagcagtagtcctatgcct
ggtgtagcagcagcagcagctgttgctgctgctgctgctgcggcagcaccacccatactg
ggcacaccaccatcagcacacccaagtaaccaagtacctgcacctgtacaacaacaacaa
caaacagtacagagagacaggcataatgcaggtggagcagagatagaaggctccatggct
gggcttagtctttctccatcccagcctgtaggaggagcaagagccaaggaagggacatca
tccgctaggtttgtggagggcgaggaaggggaaagcccaagctgggaggacgactataaa
gcctgggaggaaaaatgcgctggaaaacagcgcaagaaacggaatcaagcgtgtacttta
gaaactacctcaacgggtgtagaagtgaaacttaacttggcagataactctcccacctct
ggtcgatgtgcagcatggatcaagtctacaggcccaggctcggactctggctcttcagga
aactcctcagacagcattgtgtcctcgtcaagtggggataaaatcagcggacttgaggca
aacaaacctgtggaatcgccaccacttggctacccattggtacgacctgttccccagccg
acgccagaaagcacaactacaacccatcctagaccacagcctacctacgggaaaggtgtg
cgttttaagggcaagagagcttatccaactgtgcccaatcaaccatccgaggctagtgct
tatttcatgtttgagttggccaagaccgtgctgaacagagctggaggaaatattagcacg
tcgctgtttactcagccaagcagttcacagaaccatagagggccacatcgaccactccac
atgtgtgcattccagattggcctctatgccctcggccttcacaattgcgtcagccccaac
tggctctcaagaacatattcctcacatgtttcatggattacaagccaagctgtggaaatt
ggatcaccagcggtttcatttcttattgatacttgggagggccatctaactccacaagaa
gctgcatcaatagcagaccgggcatcaagaggtcgtgatgctgcaacaataaaagctgca
gcaaaattagccttgtcctgcctgcctcatgctcatgctctgaaccctaatgagattcag
agagctatcatacagtgtaaggagcaaagtgatgaaatgcttgaaagtgcttgctttgct
gtcgagggtgcagctaaaggtggtggtgtgtaccccgaagtcctgttctcggtggcacgg
cgctggtacgaactttacgaggcccggacaaggcaccaagcccgtcatcaagcaaggact
tcaggtggccagcatgctggggatatcccatttgaagatcctggtgccccacacaatctc
ccacttcctccccctccaccactaaatccacctacacctccaaaccagcaacagcaacag
ccacctattcctccaatggatgcccagtctcaacctgggttacatcctccagtttcagtt
gggatgaatggaaatggtggtgcaggtgcattacctggtgttgcaggctatccagttgca
gccccaccttcttcggtgccatatgccctcacaggcattccatatcagctgggatataat
tacattcagggcttgccaacaagtgtatcatgcatcaacccacaaatgcccatgccgatg
tatatccagccaccaggtgtacctttcagtggggcacaaggggtgtctcaacccctcatg
cctcctccttccatgcagtacttccctccagtgtctataccctcaactctaccccagaaa
attttgacttcaaaatccatccacgatttggccgcctcacgtcattacagcataaggcag
atcctggatgctaccccaaggttctcaaaaggtactctaccaggagcagggggcatggga
ggtggtctcccaggaggacagcagaatctaggaccacagcctcctcccttaggtgcagga
cctccacccttgccacagcagcctcctctaatacagggcaacacacctccacagcaggga
ttttatccgctgccatactccaatgcggttggaagtggaggtgtatcaacagcaggtttc
ataggagctcagcccacagccctcctctcatgggttagagcccagggccctcacatggtc
caaccttccccacatcagccccagctgcctccaccacctacctcacaaccacagcaacag
gttcctgggcttgttggtggccagcaggtgaacaataacggatctatgaattacttgttg
agcacatatcgtgtgggtatgttggcactggaaactctgggcaggagggtccatgatgac
agaccacaggcaaagtatgccagaaacccaccctacggagaggatgtcaagtggcttctg
ggagtggccaagaagcttggacaacagtatcttcatcagttctgcatgtgttcggtgaat
agtgtggtttcacccttcgtgcttcaggaactgtctgtggagtcggctcagtatctagct
cggcactcaccagccctcttctcacagcagctccgttctccaattctgcaacctcttgta
cagaaatgtcaacagatgttcatccaatgtacccacctcaagatgtattacataacccca
actgaatatgatgagtttatctccatcatccgagctgctcgatctgccttccaaatgaca
ccaggtggaatggtacagttcaatgagctactgcaagcattgagaaggtcaaagtcatgc
aagaaggaattgtggaccagaatcacaaatgcactgcagcagccaactcctgtatga
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