Penaeus monodon (black tiger shrimp): 119580874
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Entry
119580874 CDS
T08784
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119580874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119580874
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119580874
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119580874
Coactivators
SAGA/TFTC/STAGA complex
119580874
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119580874
STAGA complex
119580874
TFTC complex
119580874
SAGA complex
119580874
SLIK complex
119580874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
WD_LRWD1
RMC1_N
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
LisH
WDR54
Motif
Other DBs
NCBI-GeneID:
119580874
NCBI-ProteinID:
XP_037785019
LinkDB
All DBs
Position
14:11468240..11480443
Genome browser
AA seq
747 aa
AA seq
DB search
MSDAAGPTYASLTPANPTIINGLAGVDLQTGQQLTTHQGVMNHSDQTVVNSVNVVNTVGV
AGTGAVQTVASPIMATVIPPNSGSPAQANGNATATTGESSVSLDRNSLVAVLNFLKKNQF
KATEDLLRQETNFYDTVSDSEGGIGGDSEVTSVLSAYKSEGDPAEYEDAYKSLQNFIEKS
LDAYKHEVALVLFPVFVHMYLELVYNGHEEVAKSFMEKFGNTQEDYFEEDMHKLSLVTSR
DHMTGYQIMDNFRSNQFTVRMSRDTYAHLKRYLTERGGGPVARIIHDRLYLDVYEGVPRT
RAQVGATAGAQEGEAPKQVNKTKIYYGLLKEPELPNLAMEEEEGEEEGDKPKKKKPKKDA
LQKSKKNDPNAPPTYRIPLPELRDIDRIEKAKAFRDTVKRVTLNRETLPSICFYTFLNAT
GNVTGVDISDDSSLLAYGTADSQVRVQSITPSKLRCMKSAEQLNNIDKDADDVLVRMMDE
RTADYVRTLLGHSGPVYACSFSPDRNLLLTAGEDGTIRLWSLQTWTCLVVYKGHVFAVWD
VRFSPYGYYFASGGHDRTGRLWATDHHQPLRIFAGHFSDVDVVQFHPNSNYVASGSSDRS
IRLWDVLNGNCVRVLTGHKDVIDALAFSPCGRFLASGGGDKRVLVWDLANGHLIAEMLSH
TSTIYTISFSRDCNMLASGGLDNCVKLWDFTRVLEDNHEEDVSVSHNPEVKRSESLLLGT
FPTKNTPVLATHFTRRNVLLAAGPFEG
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcggcgggccccacttacgctagtttgacacccgctaacccgaccataatc
aacgggttggctggtgtcgacttgcagacgggtcaacagctcaccacacaccaaggagtc
atgaatcacagcgaccagacggtggtgaactctgtgaatgtggtgaacacagttggggta
gcagggactggcgccgttcaaactgtggcatcgccaattatggctacggttattcctcca
aattcagggagtccggctcaggcaaatggtaatgcgacggcgactacaggagagtcctcg
gtttccttagatagaaactctctcgtcgcggtcttaaactttttgaagaaaaatcagttc
aaggcaacagaggatttgctaagacaggaaaccaatttttatgacactgtttctgacagt
gaaggaggtattggtggtgattcagaggtcacaagtgttttgtctgcctataagagtgag
ggagacccagctgagtatgaagatgcctacaaaagtcttcagaactttattgagaagagt
ctggatgcatacaagcatgaagtggcattggtgctcttcccagtgtttgttcacatgtac
ctagaattagtatacaatggccatgaggaagttgcaaaatcattcatggagaagtttggc
aacactcaagaagattactttgaggaagatatgcataaactttctcttgttacatcgagg
gaccacatgacaggatatcaaatcatggataactttcgatcaaaccagtttacagtgaga
atgtcaagagacacctatgcacacttgaaacggtacctgactgagcgtggaggagggcct
gttgcaagaatcatacatgaccggctgtacctggatgtttatgaaggagttcctcggaca
agagcacaggttggagcaacagcaggagctcaggaaggagaagcacccaaacaagtcaac
aagaccaaaatctattacggactcctgaaagagccagagctgccaaacttagcaatggag
gaagaggagggtgaagaagagggagataagccaaaaaaaaagaagccaaagaaagatgcc
cttcagaagagcaagaaaaatgatccaaatgcaccacctacctacagaatacccttgcca
gaattgcgggatattgatcgaattgaaaaggccaaagcattcagagatacagtgaagagg
gtcacactaaacagagagactctaccatctatatgcttctatacatttttgaatgctaca
gggaacgtaacaggagttgatatatctgatgattcgagcttgctagcatatggtacagct
gattcacaagttcgtgtacaaagcatcacgccaagcaaattaagatgtatgaagtctgca
gaacaattgaataacattgacaaagatgctgatgatgtcttggtacgtatgatggatgaa
agaactgcagattatgtccgcactcttcttgggcattcaggcccagtttatgcttgctcc
tttagtccagaccgcaatcttctgttgacagcaggagaggatggtactattcgcttatgg
agcttgcagacttggacctgccttgttgtgtacaagggtcatgtatttgctgtatgggat
gtgagattttctccctatggctattactttgcatcaggaggtcacgatcggactggccgt
ttatgggctacagatcatcatcagccattaagaatttttgcaggacatttttcagatgtt
gatgttgttcagttccacccaaacagcaattatgttgcttctggttctagcgatcgcagc
atcagactttgggatgttctcaatggaaattgtgttcgtgttctaacaggccacaaggat
gttattgatgcattagcattttcaccatgtgggaggtttctggcttctggtggtggagac
aagcgtgttttagtatgggatctggcaaatgggcatcttattgctgaaatgttatctcat
acatcaacaatctacacaatttctttctcaagagattgtaatatgcttgcttcaggtgga
ctggacaactgcgtaaagctgtgggacttcacacgtgttctagaagacaatcacgaggag
gatgtcagtgtatctcacaatcctgaagttaaacggagtgaatccttgctcttggggaca
ttcccaacgaaaaatacaccagtgcttgcaacacactttaccagaagaaatgttttgttg
gctgctggaccatttgagggatga
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integrated database retrieval system
