Penaeus monodon (black tiger shrimp): 119582008
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Entry
119582008 CDS
T08784
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmoo01002
]
119582008
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoo04121
]
119582008
Enzymes [BR:
pmoo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119582008
Peptidases and inhibitors [BR:
pmoo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119582008
Ubiquitin system [BR:
pmoo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119582008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
BRD4_CDT
TFIIA
Motif
Other DBs
NCBI-GeneID:
119582008
NCBI-ProteinID:
XP_037786131
LinkDB
All DBs
Position
15:complement(37096460..37099847)
Genome browser
AA seq
2036 aa
AA seq
DB search
MPLRDKMVLTAKLVQVGSNMPSSPDSSSDSSTGSPQHPYEGPNVDAENCLPGVIMSGQAK
YTQFLLQLADLGCTLQLPQLRDSARALLEIMPADQYTVNNLRTLCMEHAKIGDQNMSPSL
ESIVFSPSPSQVLYNLQVLYSLLMPAHNPMSEKAHEFQYNFMKSGGVKLIIDMLSKNNFL
SNTDMPTKRSAFLVVLKLAKLAFVTVGYAIVGVVAGAVTSSGTTTTGSNGGSEGSSPTGA
VSLAASTHTQALVLQEALHHIPNPASDCMVRNVASRLAQSLHDQVTITSCLWAHFVTGVV
PDMSVVRAILKITWASAAGQGHLITSSLDEIEKAAERPPTKPPDPEDLCVCREGLETLSV
VLALYPPALETLTKDTQFHKLVMGLVLVGGERSIRQCAVEQLLLMATKCSNSPHTLVVFI
VMLFNVLNGLNSEYSKEYFQLLCGLLNWACVSSVTVTGVDRLLTTEVEWLKNVRASVAQM
AQGGPEPPVDETLLEGHLCVTRELVAFLPPEKKYEIGGDPSKGIFLIRELVEDFIFPFSK
VYLQLEHAAEMPAEQAIPVCSTQPTVIAAYELLVTLCTGCVPNLKLLAEMLTNMYYSDCD
ESIGEWEYLPPVGPRPMKGFVGLKNAGATCYMNSVLQQLYMIRQIRHGVLAVEGAATDPE
EDFSGEERMEQETNLDGNEDDAMSSSSNEESRKEYHIGILKQVQAIFAHLACSKLQYYVP
RGLWKHFKLQGEPVNLREQHDACEFYNILVESLNEALKALGHEQIMNKILGGSYSDQKIC
KTCPHRYSREETFTVISIDIRNYSNLYDSLEQYVKGDLLEGDNAYLCEKCDKKVDTVKRI
CLKKLPPILAIQLKRFDYDWERECSIKFNDYFEFPRELDMDPYTVAGLARNGELIDYDPE
DMKTVICSKYKLTGIVVHSGQASGGHYYSYILHRNGNDQRWYKFDDGEVTECKMDDEEEM
KNQCFGGEYMGEQVFDNIMKRVSYRRQKRWWNAYLLFYTRLDVEEDNLCNSINELSIAER
PGLIKMPSAIERSVVRQNVRFMHSRSQFSPEYFQFLKKLILTNQPYVLPAPQDRIVESEE
IAMISTQLCSKFLFSVGLHTKKTLRGPAPEWYDALQVHLRASVHTRAWFAQQILFAQPHR
FVEYLLECPAPEVRMVFSKLIVLVAHCARNDGPQPLGWGPLKHHPGLDMASGSCTLSDQL
LVAVLQLLNKDVSEHGRHLTQYFHLFNLYASLGPPEKLQLLKLNVVEMFMLVALDEGPGP
AIKYQYAELGRLYQVVSQLIRSCDVSQKQQSSQPNTAPLPNPHGDPACAEPLMPIQPKVV
EILYGRATYVKKIIEDANSSEDTVKLLKFCCWENPLFSSTVLSELLWQIAYSYTYELRPY
LDLLLHMLLLDDSWQNHRIHNALKGIPDDREGLFDTIQRSKNHYQKRAYQCIKCMVALFS
SCPAAQQMLHSNGDLKRKWTWAVDWLNDELDRRPYAAANQQYGFSNWSPPAQSNETSNGY
FLERSPSARSTLEKAYELCPEDEPEAEEGEEAEVAVPEEVAPLPPVSDPVQQQQQQQQQQ
QQQQQQQQQQQQQQQHAHHQHHHHHHHQEHTSHALPPTSEEQHIHHQQQQHLQLQEQLEQ
LQHHHLQQQLHHHHQQQHAMSHNMSGGLPHPSVSNGFSADMPLGMAQSLVHSLAGIGAIT
GMPGLSSLGPSGLEGLGAAVTGSMLPGLVDAASTNSANISVAAASNAVPTHNPMMATHDT
HQEMPSHLPETSLADLKAAGLDTSLSYYSSIPQTQSDTSIMRKQSEEELNPEAQALQRQH
AEASALASYLAAQDKKPPSSAPETPKSSGGSSFSKPKPTPKNLSSWSSLAQSAVPSPTAS
TSLKTSASDSFAQFKRVAKEKEARQRQIIEQQEQRRQQKEQVEKERARQEAERERARLEE
EALDRAMEQAKEIRATQEVQRREPVAIRERPPSSAKVATPMTASTSPHPQLATPAGPPSS
HPPATPTSSIDNAKQSDRDRQKLREQERRRREAMAGQIDMNRQSDLMAAFEEQCGK
NT seq
6111 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttagagataaaatggtattgacagctaagctagtccaagtcggaagtaacatg
ccatcatctccagacagttcctccgattcttcaacaggttccccacaacacccgtatgag
ggacctaatgttgatgcagaaaattgtcttcctggtgttataatgtcaggccaagcaaag
tatacacaattcctcctgcaattagcggacttgggctgcactttacaactaccacagttg
agagatagtgcacgtgctctccttgaaataatgccagcagaccagtacacagttaacaat
ttacgaactctgtgtatggagcatgcaaagattggagaccagaacatgtctccttcttta
gagagtattgtcttttcaccttctccatcacaagtcctctataacttgcaggtattatat
tctctcctcatgcctgcacataaccctatgtcagaaaaggcacatgaattccagtacaat
ttcatgaaaagtggaggagtaaagcttatcattgatatgctgtccaaaaacaacttcctt
tcaaacacagacatgcccaccaaaagatcagccttcttagtggtattgaagctggcaaag
ttggcatttgtgactgtagggtatgccattgttggtgttgtagctggagccgtgacttca
agtggcacaactacaactgggagtaatggcggctcagaggggtcttctccaacaggagct
gtaagtttggcagcatccacgcacacacaagctttagtgctccaagaagcactgcatcac
atccccaacccagcctcagactgcatggtgcggaatgtggcatcgcgtctggcgcaatcg
cttcacgaccaggtcactatcacatcatgtctctgggcgcactttgtaactggtgtggtc
cctgacatgagtgtggtcagagctattcttaaaattacctgggcttcagcagctggccag
ggccatcttatcacatcatctcttgatgaaattgaaaaggcagcagagagaccacccaca
aaacctccagatccagaggacctatgtgtgtgccgtgagggtctggaaacactatcagta
gttctagccctttatccccctgcacttgaaaccttgaccaaggacacccagttccacaaa
cttgtgatggggttggtgttagtaggcggtgagcgaagcatacggcagtgtgcagtggag
caactcttacttatggctaccaaatgctcgaactcgccccacaccctcgtcgtctttatc
gtcatgctgttcaatgttctcaatggcctcaatagcgagtactcgaaagaatattttcag
ctgttgtgtggattactaaactgggcgtgtgtatcgagtgtgactgtaacaggtgttgac
cgcctactaaccacggaagtggagtggttgaagaatgtcagagccagtgtagctcagatg
gcccaaggtggaccagagcccccagtagatgaaactttgttggaaggccatctctgtgta
actagggagcttgtagccttcctccctcctgagaagaaatatgaaattggtggtgatcct
tccaaaggaatttttctcattagggaacttgtagaagactttatattcccattttctaag
gtgtaccttcaattagagcatgccgcagagatgcctgctgagcaggccataccagtgtgc
tcaactcaaccgactgtgatagcagcatatgaactcctagtcactttatgtactggctgt
gtcccaaacctcaaactgctggcagaaatgctcaccaatatgtattattcagactgcgat
gagagtattggggaatgggaatatcttcctcctgtaggcccacgacctatgaaaggtttt
gtgggtttaaagaatgctggggccacatgttatatgaattctgtcctccaacaattatac
atgatccgacaaataagacatggggtcctagcagtggaaggcgcagcaacagatccagag
gaagacttcagtggtgaggaaagaatggaacaagagaccaaccttgatggtaatgaagat
gatgccatgagtagtagttccaatgaagagagcaggaaggaataccatattggtatacta
aaacaagtgcaagccatctttgcacatctggcatgttccaagctccaatattatgttccc
agaggactttggaaacattttaaattgcaaggggaacctgtaaatttgcgtgaacaacat
gatgcttgtgaattttacaatattttagtcgagagcttgaatgaggctctaaaggcatta
ggacatgaacaaataatgaacaagattttaggaggatcatattcagatcagaagatctgt
aaaacttgtccacatagatattcacgtgaggaaacctttacggtcatcagcatagatatc
cgaaactacagcaacttatatgactcacttgaacagtatgttaagggagaccttttagag
ggggacaatgcctacctatgtgaaaaatgtgacaaaaaggttgataccgtgaaacggata
tgtttaaagaaactacccccaattttagcaattcaactgaaaagatttgactatgactgg
gaaagagaatgttcaatcaaattcaatgattactttgagtttccacgtgagttagatatg
gacccatatacagttgctggactcgctagaaatggagaactcatagactatgacccagaa
gatatgaagacagtgatatgtagcaagtacaagttgacaggcattgtggtccatagtggt
caagcaagtggagggcactactattcatacattcttcacagaaatggaaatgaccagcga
tggtacaagtttgatgatggagaggttacagaatgtaaaatggatgatgaagaagaaatg
aaaaatcagtgttttggtggtgaatacatgggcgagcaagtatttgataacatcatgaaa
agagttagttatcggagacagaagcgatggtggaatgcttacttgctgttctacactcga
ctagatgtggaggaagataatctctgcaactctataaatgagctcagcatagcagaacgc
ccaggattgataaagatgccaagtgccatcgagcgatcagtggtgcggcagaatgttagg
tttatgcattcccgctcccagttttctccagagtacttccaattcctcaagaaacttata
ttgaccaatcaaccatatgtactaccagcaccacaggacaggattgttgagagtgaggag
atagctatgattagtacacagttatgcagcaagttcctcttttctgtggggttgcataca
aagaagactttacgtggaccagcgccagagtggtatgatgccctgcaggtccatttgcga
gcatcagtccacactcgggcatggtttgctcagcagatattatttgcccagccacaccgt
tttgttgaatatctcttggagtgtcctgcgcctgaagtacggatggtatttagcaagctt
atagtactagtggcccattgtgctcgtaatgatggtccacagccactgggatggggacct
ctcaagcatcatcctggccttgatatggcaagtgggagctgcacactaagtgaccagttg
ttggtagctgtgttgcagctgctgaacaaggatgtatcagaacatggtcgtcatcttact
cagtattttcatcttttcaacctatatgcatcattgggtcctccagagaagttgcagctg
ttgaagttgaatgtggttgagatgtttatgttggtggctttagatgaaggaccaggacca
gccataaaatatcaatatgctgaacttgggagattatatcaggtggtttcccagttgata
aggtcttgtgatgtctcccaaaaacaacagtcttcacaaccaaacactgcaccattgccc
aatccgcatggagatccagcatgtgcagaacctcttatgccaattcagcccaaggttgta
gaaatcctttatggaagagcaacgtatgtgaaaaagataattgaagatgctaacagctct
gaagacacagtgaagctcctcaagttctgttgttgggagaatcccctcttttcttccacg
gtgctctcggaactcctgtggcagatagcctattcctatacttatgagctacgaccctac
ttagacctacttttgcatatgctgctactcgatgattcttggcagaaccacagaattcac
aatgcacttaaaggtatcccagatgacagagagggcttgtttgatactatccagaggagt
aagaaccattaccagaagcgagcctatcagtgtataaagtgtatggtagctctattctct
tcctgtcctgctgctcagcagatgcttcactccaatggtgatctaaagaggaaatggacc
tgggcggtagattggctgaacgatgaactagaccgtcgaccatatgcagcagccaatcag
caatatggattcagcaattggtctccacctgcacaaagtaatgaaactagcaatggctac
ttcttggagcgttcacctagtgctcgttcaacgctggaaaaggcctacgaattgtgccct
gaggatgagccagaggcagaagagggtgaagaggcagaggtagcagttccagaagaagtt
gcaccccttcctcctgtatctgacccagtgcagcaacaacaacaacagcagcagcagcag
caacaacaacaacaacaacaacaacagcagcagcaacaacaacaacatgcacatcaccag
catcaccaccaccaccaccatcaggaacatacttctcatgctctccctccaacctcagaa
gaacagcatatccaccatcaacagcaacagcatttacaactacaggaacagttagaacaa
ttacaacatcaccacttacagcagcagttacatcaccatcaccaacagcaacatgccatg
agtcataatatgtcagggggtttaccacacccatcggtttcaaatggcttctcagccgac
atgccactgggtatggcccagtcattggtgcatagcttagcagggattggtgcaatcaca
ggcatgcctggtctgtcctcccttggcccctctgggctagagggactgggtgctgctgtc
acgggtagcatgttgccagggcttgttgatgctgcatcaacgaatagtgccaatatttct
gttgctgctgcctccaatgcagtaccaacacataacccaatgatggcaactcatgacaca
catcaagaaatgccatcacatctgccagagactagcctagcagacttaaaagcggcaggc
ttagatactagtttaagttattattcgtcaattccacaaacgcaaagcgacacatctatc
atgcgcaaacagtcagaggaggagctcaacccagaggcccaggccctacagcggcaacat
gcagaggcttcagcattggcaagctacctggctgctcaggataagaagcccccttcctct
gccccagaaaccccaaagtcatctggaggaagctctttcagtaaacccaaaccaacaccc
aagaacctcagttcatggtcatccctagcgcagagtgccgtcccttcacccacagcctcg
acctctctgaaaacctcagccagtgattcctttgcccagttcaagagagttgccaaggaa
aaagaagcaaggcaacgtcagatcattgagcagcaagagcagagaaggcagcagaaggag
caagttgagaaggaacgtgcaagacaagaagcagagagagagcgtgcacggttagaggag
gaagctttggacagggcaatggaacaagctaaagaaattcgggccactcaagaagttcaa
agacgagaaccggttgctatacgggagcggccgccgtcaagtgcaaaagtggccactcct
atgacagcctcaacttcgccccacccccagctggcaacgcctgcaggaccccccagctca
catccccctgccactccaacctcttccatagacaatgcaaagcaaagtgaccgcgacaga
caaaagctgagagaacaagaacgaagacggagggaagctatggcgggtcagatagacatg
aatcgccaaagcgacttgatggctgcgttcgaagaacagtgtggaaaataa
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integrated database retrieval system
