Penaeus monodon (black tiger shrimp): 119582071
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Entry
119582071 CDS
T08784
Name
(RefSeq) vacuolar protein sorting-associated protein 13-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoo04131
]
119582071
Membrane trafficking [BR:
pmoo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119582071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
119582071
NCBI-ProteinID:
XP_037786242
LinkDB
All DBs
Position
15:complement(47547223..47595585)
Genome browser
AA seq
3286 aa
AA seq
DB search
MNNLDSLGIYWNPKATLFSQTELSKEEIVKSLQGIIASRDNLPAGMHYVIGPIRSMAKLQ
VNPKPETDEAKFSTPKVLLNFVMDELAIGLTRHQYSDLMALLDSMDRMRLSSMYRKYRPN
VMEIKNNARHWWHYAYNCNLENIQRIHRNWSWKHIREHRARCRSYKAVYKLKLENKKLTP
EQVKEIEDGERALDVFNITLMRRQAEMEVEREGALRRQEQQQQKGWFGGWFSWGGQKQDE
REAAEGSLVKKLEEAMGDEEKKNLYEAIGYSETGIPPEYPEEFEDIQLEFLLKQLVLIIK
DDENEGATVTKAKLNTVTLDLKRRSAAESVRVVTSVQSFVVEGFSTDGSPPELVTSEDTS
KEKPLLQVLFETNPMDKSCDQRVKLEAQPLQLVYDAATFNQLQDVFAPPKNISLQQLQAA
ALNQLEVVKERSVTGLQAAIDNHSVLDLNIAIAASHMIVPEKGVYSKDCSAVVLTLGSMT
MKTVPRKRDAPALTDLVTRGMSQEEVVEVVRSSSYDHFTIELVDTQAVVAMSGEDWRTTL
SSKEPTPLHLLQPTTLHVDLLKCLLTDDPNLAKVKVNVSLPNVTLSIVDERLLQLAYIAH
SIPQPEQPEQEEDEEDHFDQDTDLNMNVILEDAAIARLEKVKLNPDGQPQDTPQFTKLEL
SFSLKETSLELKRATGKTYQPLMKLSALSTSVEVVQRTFDLTASVILGGVLVQHLDGCDR
WLLSTPLAEGSSEEALLTIKFTQVDPKCPDFESKHASTLQLLCVDVTNLTAQLEQTAILS
IIAFAEQLSSKLGEVAPTQPVEEKAAIEPLQKVGDEMSDKKTQSKPLGKLKRKSLVKGKK
KDVKEITTLRVLARLGRVSVVIGLANRDVAQVEVAGLVANIMMQGKDITISSRLKDFTVI
DPGSGALHPKIVEVMDAEAWDANVKVYGEATEGHNYLDMNRVNTSVALTFGCARIVFLNK
FIKDVLSWINTFQSAKDAVASASVAAAAAAQARMQEAYQECSRVSLALTLRAPLILIPQD
SHSLSGLMVDLGEISIRNKFVLGEDRNELGYPSIFDEMTLELYNVKVSRVVLSATGVAEQ
EHGLLQPISLDISVKRNLTISWYKKKPELEIQAMLKPIKMVLSEEDLRVTLTVLQDNLGE
QGDVSLSEVNAPQVDRAVKRTRKKEITENAQDVEMFLAQHGHSYTKISFTFTIESVTLSL
LTSAQGTKESLLFEDESMESLTSSSFKELSPQPGTSDTFALPRVSLGDARGSRRSLPHVT
GDVAMQELGLVAHGRELAEFSLKVVTLKGDMCSDGSLSANLVLFDCVLQDTRPGQEGHIT
RMMRRKPQTGKNGMIDLTYRQGPSGDTFIDMRISGFVLLLHLPYLLRIQRFFTDNLPQKP
QEPSPPPLAAPKAKDFKRQKSGISTIDMEKHTANLMTVRFRVEQPDIAIVKDVTTEDTHC
IIMHAEVNGDLKTTALQQSVNASITKIQMYTCCYNPSRRKETLSQILNPCEIGFVSSSTP
SHAQHLDVTVSRVDLRVSPITIELLSSLTMALTALEEPVNAEVEEIKEWVDLWDPRPLDI
SQYDFLAVEEASEAFGEEAMEAMSPVKQGPGGELAVVAMECFLVTIETGSGTSPIPLIKF
QSSITLTASGFFSKKLSVNGDLSIELAYFNSRLAVWEPLLEPVEVVNRSAFPDHAPWSLH
FEMSQEMGTNGPKSPGKSGPTSPIASPESDEVDFEELQAPLPATTISVTAKDSLHLTVTK
TFMEVLTTLSKAFADAYKRNLTARDTHLAPYRIINQTGKNVSVAVRQSGFQVAAEGGENV
EEVMVESGAEVDLFEIAPQTPKHKRVASLVADYQAVQDRNITFRIPDLGCQCTIPVSRAD
KRYFQVEHTRGGEKWGLVAAISVESGCKIITLSSCVQITNHLDVTVEVYYMNERGNEVVH
VVSLKPGEMASLPLHAVYTLTAEIFFSVEGHSVCIIPFIWRDLQNSPNLVQELQCVPRDV
DEYHSSPFFIAAIGDVEQILWQNTSRRTMTSALYKIHLKPKVVLHNLLPVPVSVEPPGTM
CTNVLMPGASVQLTKAQLGMSYLNLQILNYQGCDWVCGKPLAEKPQELSVWTFESRGDIM
GGPLQLDLGMMASAPGSTMTLNLYCPFWMVNKTGLMLTYRKSRKVERASLSSPPESPSNT
LQRWASSVSLVSLSSRVGGVSDAPSNYVVHEEGNGEAVMFSFKSKAFFGKKKVTVKVEDS
EFSEKFSLDVVGSSGSVSCKSPSRTYQVGVDIQLGNSGLTKIVIFTPFYKILNKAPFDLE
VMEAEFPHAEWFTVLSGECIGWWPIGNGRRIHVRIRGTSEMTAALRYDQPLSTLLYIPNK
YGGISAEVNLMDGGAMVQLDQFSEGMTPVLIINHLTNTTVSLWQHNNDNKKVHVKPQSIQ
HYTWSDPGGSLQLVWACGAGKTTQHSLDKDERGQMNDDTVHWVVFLFGNQRCLLFTDEIE
IATAALNAVESERINQELKFSLSSIDLSLVDDVRKKEVAYMSLASSGVVWEYRKIKGRKY
RPFTQNQTNELEVCHNLYQAQLKTFSGGAPIQSYYVIRDNFEVDFENMRILKPFHKNIRR
TFQPGIWFELRTSPHQRQIHLKINSLQIDNQMTDVMFPVVLARVPPPRSVMAETVAKPFC
EVSIVQRLTSPSFSQYKYLAMLIQEFHIKVELPFVYAVLEVLFPSNDVSDNLYSMEEFDE
DNKLVRETLTMRAQSQAVSGQKDYYDLLHLSPIKMHLSFSLSGSESGASLPVGGQVIHLF
LESVGVTLTEVQDVVFRLSYMERQNKWMTLGQLTQEMISHYRGQFLMQLFKVVLGLDVIG
NPYGLVIGLTHGVESLFYEPIQGAIEGPGEFAEGMLYGLTNFMGATVGGAAGAVSRITGT
IGKGVAALTLDDDYQRRRREAMHRKPADGIESLARGGKGMVTGVFDGVTGVFLKPIEGAK
KEGVEGFFKGMGKGMVGLVTRPASGVIDFASGSFDAVMRATEAGEETVSRRRPSRFIGPD
NVVRPYVQHFAEGAKLLRELEKGRYAETDVYVGHAIITENRSMLIATDKRIMCITRNDIL
GHWKVDWLHVYEDLSEPPFITPKGLRLSVRQEKKRVLGVFGGGDNSKLVPLKDPEEGKVS
FQNRGSSVNVTHSRQHGRTMHAVPPVQPTSTGPSSTHSLRSSSFTPKRSSSSLAGGQQQQ
TQRRGGLFGVLGALSTGVVQAGRGVSQGISQLGNIGSQGRGSTPRSEVRGHVEQGFEVIP
HSAEVSAPKEVAEDIVSYIQVPYESLEMQAFLTAVIEAYQKTKCSK
NT seq
9861 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttggacagcctaggcatttactggaacccaaaggcaacgttgttttcccag
acggagctctcaaaggaagaaattgtgaagagcctccagggtattattgcatcccgcgat
aatctgccggcaggaatgcattacgtgattgggccaattcgttcaatggcaaagcttcag
gtgaaccccaagccagaaacagatgaggcaaagttcagcactcctaaggtccttctcaac
tttgtcatggacgagcttgcaataggtctcacccgacaccaatattccgacctcatggct
ttgctggattctatggacaggatgaggctctcgtctatgtaccgcaaatatcgacccaat
gtcatggaaattaagaataatgcccgacattggtggcattatgcttataattgcaacttg
gaaaacattcagcgcattcatcgcaattggtcatggaagcacatcagagaacatagagct
cggtgtcgttcctacaaggcagtctataagcttaagctagaaaataagaaattaactcca
gagcaagttaaagaaattgaagatggagaaagggctctggatgtctttaacatcacacta
atgcgccggcaagctgaaatggaggttgagcgggaaggagctcttcgtcggcaggagcaa
cagcaacaaaagggctggttcggaggttggttctcatggggcggccagaagcaggatgag
agggaagctgcagaggggagcttagtcaagaagctagaggaggcaatgggtgacgaagag
aagaagaacctgtatgaggctattggctattcggaaaccggcatcccaccagagtacccg
gaggaatttgaggatatacagctggaattcctcttgaagcagctagtcttgattatcaag
gacgatgagaatgaaggtgctaccgtcacaaaggccaagctcaatacagtcactttggat
ttgaaaaggagatcggcagctgaatctgttagggttgtcactagtgtacagagctttgtg
gtggaaggtttttccaccgatggttctcctcctgaactggtgacatcagaggacacttcg
aaggagaaaccgctcctccaggtgctgtttgagacgaacccaatggacaagtcatgtgac
cagagagtgaagttggaggctcagcccttgcagctggtgtatgatgcggctacattcaac
cagctgcaggacgtcttcgcacctccaaagaatatttccttgcagcaactacaggctgca
gccctaaaccagttggaagtggtgaaggagagaagcgtcactggtcttcaggctgccatt
gataaccacagtgtactggatctgaatattgccatcgcagcttcgcatatgattgttcct
gagaaaggagtgtatagcaaagattgttctgctgtggtcctgactctgggtagcatgaca
atgaaaacagtacctcgaaagagagacgctccggctctcactgacctggtgacccgaggc
atgtcacaggaggaggttgtggaagtagtcaggtcttcttcatatgaccacttcactatt
gagctcgtagatacacaggctgttgtagccatgtctggagaagactggagaaccactctg
agttcaaaggaacctacgcctctccaccttcttcagccgaccactctacatgtagatctt
cttaagtgcctccttacagatgaccctaacttggccaaggttaaggtcaatgtgtcccta
cccaatgtgaccctttctattgtagatgagcgccttcttcagctggcctacattgcacac
agcatacctcagcctgaacagccagaacaagaggaggatgaagaagatcactttgaccag
gatactgatctgaacatgaatgtgatcctggaggatgcagccattgctcgcttggagaag
gtgaaacttaacccagatgggcagccgcaggacactccccagtttaccaaactagagctc
agtttttccctgaaagagacaagtcttgagttaaagagagccacagggaagacttaccaa
ccactaatgaagctgtcagctttgtcaactagtgtggaagtggtccagcgcacatttgat
ctcactgcctcggtgatcctcggaggtgtattggtccagcatctggatggctgtgatcgt
tggcttctaagcacacctctggcggagggcagcagtgaagaggcactcctaacaatcaaa
ttcactcaggtagaccccaagtgtccagactttgagagcaagcacgcctccacccttcag
ctgctctgtgtggatgttaccaatctgactgcccagctagaacaaacagccatcctcagt
atcatagcctttgctgagcagctttcaagcaaactaggggaggttgcaccaacacaacca
gttgaggagaaggcagcaattgaaccattgcagaaagtaggggatgaaatgtcggacaag
aagacccagagtaagcctttgggcaaactaaaaagaaaatctttggttaaaggaaagaag
aaagatgtaaaggagattactacacttcgtgtactggcaaggctgggccgtgtcagtgta
gtcattggtttagctaatcgtgatgtagctcaagtggaagtcgcaggactggtggctaac
atcatgatgcaagggaaggacataacaatatcttcacgactgaaagactttacagtaatt
gaccctggctcaggggcacttcatccaaagattgtagaggtcatggatgcagaagcctgg
gacgccaatgtgaaggtatacggagaggcgacagaaggccacaattatttggatatgaat
cgtgttaatacaagtgtagctctaacatttggctgtgcaaggattgtgttcctaaacaag
tttatcaaggatgtgttgagttggatcaacaccttccaatcagccaaggatgctgtagcc
tcagcaagtgtggcagcagcagcggccgcccaggccaggatgcaagaggcatatcaggag
tgttcacgtgtcagtcttgctctcacactcagggctcctctgattctcattccccaagac
tcacacagcctctcaggattgatggtggacttgggtgaaatatccatacgtaacaaattt
gtgttgggagaggacaggaatgagcttgggtacccatccatttttgatgagatgacactg
gaactgtataatgtcaaggtgtcaagggttgtattatcagcaacaggagttgcagagcaa
gaacatgggctgttacaacccatctcgttagacatttcagtcaaacgaaatctcaccata
tcttggtacaagaagaagccagagctcgagatccaggctatgctcaaaccaatcaagatg
gtcttaagtgaggaggaccttcgtgtgacactcacagtgctacaggacaacttgggggaa
caaggcgatgtatcactctcagaagtcaatgctcctcaagtggacagggcagtgaaaagg
acccgcaagaaagagattacagaaaatgctcaggacgtggagatgtttctggctcagcat
gggcacagctacaccaagatcagctttacttttaccattgaatctgtgaccctgtcgtta
ctcacaagtgcacaagggacaaaggaatcgttgctctttgaggatgagtccatggagagc
ctgacttcatcttcgttcaaggagctgtccccccaaccagggacgagtgacacttttgcc
ctgcctcgtgtaagtcttggggatgcaagaggcagcaggagatcgctgccccatgtgaca
ggcgacgtagctatgcaagaattgggattggtggcccatggcagagagctggcagagttc
agcttgaaggtggtaacgctaaagggagatatgtgctcggatggatcgctgtcggccaat
ctggtgctgtttgactgtgtcctgcaagatacaagaccaggtcaggagggccacatcaca
cgaatgatgagaaggaagccacagacaggcaagaatggcatgatcgacctcacctaccgc
caagggccatctggggatacttttattgacatgaggatttctggctttgtgttgcttctg
catcttccatacctgctgagaatccagaggtttttcacggacaacctgccgcagaaaccc
caggagccttcacctcctcctttggcagctcccaaggccaaggatttcaagagacagaag
agtggcataagcacgatcgacatggagaaacacactgccaatttgatgaccgttcgcttc
agggttgagcagccagacatcgcgattgtgaaggatgtcaccacggaagatactcattgc
atcataatgcatgctgaggtgaatggagatttaaaaacaactgcattacagcaatcagtg
aatgccagcatcacaaagatacaaatgtacacttgctgttacaaccccagccggaggaaa
gagactctctctcaaattctcaatccttgtgagattggctttgtgagctcttccacgcca
agccatgcgcagcaccttgatgtaacagtctcccgcgttgatctgcgagtgtcgccaatc
accattgaactgttaagcagcctcacaatggccctaacagcacttgaagagccagtgaat
gcagaggttgaagaaatcaaagagtgggtcgatttgtgggatccgagaccgctagacatc
tctcagtatgacttccttgctgtggaggaagcttctgaagcctttggggaggaggctatg
gaagccatgtcacctgtgaagcaagggcctgggggggagctggcagtggtggcgatggag
tgcttccttgtgacgatcgaaactggctcggggacgtctccgatccctctcatcaagttc
cagtccagcatcactctgactgcatcagggttcttttccaaaaagctgagtgtaaatgga
gacttaagtattgaattggcatacttcaactcgcgcttggctgtgtgggaaccgctctta
gaacctgttgaggtggtgaatagatctgcctttcctgatcatgcaccgtggagtcttcac
tttgagatgtctcaagaaatgggaactaatgggccaaagagcccagggaagagtggcccc
acatctcccattgcatcaccagagagtgatgaagtagactttgaggaactgcaggcacca
cttcctgccaccacaatatctgtcacagcaaaggattcattacatctcactgtcacaaaa
actttcatggaggtcttgaccaccctatccaaagcctttgctgatgcatataaaagaaat
ttgacagcaagagacacgcaccttgccccgtatcgcatcatcaaccagaccggaaagaat
gtcagtgttgctgtgagacagtctggatttcaggtggctgcagaaggaggggagaatgtg
gaagaagtgatggttgagtcaggtgcagaggttgacctgtttgaaatagcaccacagaca
cccaagcacaagagggtagcatctctggtggctgactaccaagctgtccaggaccgcaac
attacattcagaattcctgacctaggatgtcagtgcacaattccagttagccgcgcagat
aagcggtacttccaagttgaacacacacgcggtggagagaaatggggacttgttgcagcc
atatctgttgaaagtggctgtaagatcatcactctcagctcttgtgtacagataacaaac
cacttggatgtaacggtggaagtttactatatgaatgaacgaggtaatgaagtggtgcac
gtagtgtccctcaaaccaggcgaaatggcgtctttacctctacatgcagtttacacatta
actgcagaaattttcttctcagtggaagggcattctgtgtgcatcataccattcatatgg
agagatcttcaaaattctccaaatttagtacaagaactccagtgcgtaccaagagatgtg
gatgagtatcattcttcacccttctttattgctgcaataggagatgttgagcagattttg
tggcagaacacttcacggcgcactatgacgagtgcattgtacaagatccacctgaagcca
aaagtggttctccacaacttgcttccagtgcctgtctcagtagagccacctggcaccatg
tgtactaacgttctgatgccaggtgcttctgttcagctgacgaaagcccagctgggaatg
tcatatctcaacctccagattctaaactatcaaggatgcgattgggtgtgtggcaaaccc
ctagcagaaaagccgcaggaacttagtgtatggaccttcgaatcacggggggacatcatg
ggtgggccgctgcagcttgacctcggcatgatggcttccgcacctggttctaccatgact
ctcaacctctactgcccattctggatggtcaacaagacaggccttatgctgacttatagg
aaatctcgcaaagttgagcgtgcatctctgtcatccccacctgaatccccgagcaatacc
cttcagcgttgggcgtcatctgtgtctctcgtctcgttgtcctctagagttggtggagtg
agcgatgcacccagcaactacgtggtccacgaagaaggcaatggagaagctgtcatgttc
tctttcaagtcaaaagcattctttggcaagaagaaggtgacggtgaaggtggaagacagt
gaattttccgagaagttctcccttgacgttgtgggcagctctggttcggtcagttgcaag
tctccaagcagaacgtaccaagtgggagttgacattcagcttggtaattctggtctgacc
aaaattgtgatctttacaccattttacaagatcctcaacaaggctccctttgacttggag
gttatggaggctgagtttccacatgctgaatggtttactgtgctttctggagagtgcatt
ggatggtggccaataggaaatggaagacgcattcatgtgagaataaggggaaccagtgaa
atgacagcagctttgcgttatgaccaaccactctcaactcttctttatatacctaacaag
tatggaggcatttctgcggaggtgaacctgatggatggcggtgctatggtgcagttggac
caattctcagagggcatgacacctgtcctgatcataaatcatctcaccaacacaactgtc
tctctctggcagcacaataatgataacaagaaagtccatgtgaaaccccagtccatacag
cactatacatggagtgatcctggaggttcacttcagttggtgtgggcgtgcggggctggg
aagaccactcagcactcactggacaaggatgagcgtggtcagatgaatgatgatacagtc
cactgggtggtgttcctctttggaaaccagcggtgtttgctcttcacggatgaaattgaa
attgccacagctgccttaaatgctgttgagtcagaacgcattaaccaggaactgaagttc
tcactaagcagcatagacctttcgttagttgatgatgttaggaagaaggaggttgcatac
atgagcttggctagctctggtgttgtgtgggaataccgtaaaatcaagggcagaaagtac
cgtcctttcacgcaaaaccagacaaatgaactggaagtctgccacaacttgtatcaggct
cagctgaaaacattctcaggaggtgcccctattcagtcatactatgtgattagagataat
tttgaggtggattttgaaaacatgagaattctcaaacctttccacaaaaacattcgaagg
acattccagcctgggatctggtttgagctgcgaacatcacctcaccaacgacagatccat
ctgaaaattaacagccttcagattgataaccagatgacagatgtgatgttcccagttgta
ttagcaagagtccctccccccagaagtgtcatggctgagacagttgccaagccattctgt
gaagttagcatcgtgcagagactcacctcaccaagcttctctcagtacaagtatctggca
atgctcatacaagaatttcacattaaagttgagctgccttttgtatatgccgtcctagag
gtgctattcccatcgaatgatgtctcagacaatctttattcgatggaagagtttgatgag
gataacaaacttgttcgtgaaactttgactatgagggcccaaagccaagctgtcagtggt
cagaaggactattatgaccttttgcatctttctcctattaaaatgcacctgagcttctcc
ttgagtgggtcagagtcaggagccagtctgcctgtgggaggtcaggtcattcacctcttc
ctggagagtgtgggagtgaccttgactgaggtccaggatgttgtttttagattatcgtac
atggagcgacaaaataagtggatgacgttgggccagctcacgcaagagatgattagccat
tacagagggcagttcctaatgcagctcttcaaagttgtgcttgggctggatgtcattggc
aatccatatggacttgtcataggcttgacgcatggggtggagtccctgttttatgagcct
attcagggtgcaattgaaggcccaggagagtttgcagagggaatgctgtatggactgacc
aacttcatgggagcaacagttggtggtgcggctggggctgtgtcacgcatcacaggaact
attggcaagggagttgctgccctgactcttgatgatgactaccagaggaggagaagggaa
gcaatgcaccgcaaacctgctgatggaattgaaagtcttgccagaggaggcaagggaatg
gttacgggcgtgtttgatggagtgaccggcgtgttcctgaaacccattgaaggggccaaa
aaggaaggtgtggaagggttcttcaagggaatgggcaagggcatggttggccttgttact
cgaccagcctcaggcgtcatcgactttgccagcgggtcatttgacgctgttatgagggca
acagaagcaggtgaagagacagttagccgtagacggccttcgaggttcataggcccagat
aatgttgtgcgaccatatgtgcaacattttgccgagggagccaaactgctacgcgaattg
gagaaaggtcgttatgctgaaacagacgtgtatgttggccatgccatcatcacagagaat
cgttctatgctcatcgccacagacaagaggataatgtgtataacacgaaatgacatcttg
ggccactggaaggttgactggcttcatgtgtatgaggacctgtcagaaccaccatttatt
acccccaagggattgcgtttatctgtcagacaagagaagaaacgtgtattaggtgtgttt
ggtggtggagacaactcaaagctagtcccactcaaagatcctgaggagggcaaagtaagt
ttccaaaatagaggctcttctgtaaatgtgacgcacagtagacagcatggacgtacaatg
catgctgtacctccagtgcaacccacctccactggtcctagtagcacacatagtcttcgt
tctagctcgttcacacccaaaagatcaagctctagtttagctggaggacaacagcagcaa
acccagaggcgaggaggtctttttggtgtgttgggagcccttagcacgggtgtggtacaa
gctgggagaggtgtaagccagggcatttctcagcttggcaatattggctcacaggggaga
ggatctacacccaggagcgaggtcagggggcatgtggaacaaggattcgaagtgatccct
cattctgctgaagtatcagctcccaaggaggtggcagaagacattgtcagctatattcag
gttccatatgagagcttggagatgcaggcattcctaactgcagtaattgaagcttaccag
aagacaaagtgctccaaatag
DBGET
integrated database retrieval system
