Penaeus monodon (black tiger shrimp): 119582519
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Entry
119582519 CDS
T08784
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119582519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119582519
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119582519
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119582519
Coactivators
SAGA/TFTC/STAGA complex
119582519
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119582519
STAGA complex
119582519
TFTC complex
119582519
SAGA complex
119582519
SLIK complex
119582519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
119582519
NCBI-ProteinID:
XP_037786742
LinkDB
All DBs
Position
16:12997564..13011644
Genome browser
AA seq
610 aa
AA seq
DB search
MAEDCQVAPSFPTESIKVIAESIGISAVGDDVAKELSEEVTFRLKILIQDGMKNMHHGKR
KRFSTADFDNVLKLKNIEPLYGIHPGEHIPFRFASGGGRELHFLEDKELEINEMVSSSTP
RLPLQMTVKPHWLAIEGVQPTIPENPPPITKDAQKKDSVDPAAKLSAQQENKDQKHIHGR
GMKSIETVKVKQLATHELSAEQQLYYKEITEACVGSDEPKRGEALHSLAFDPGLHQMVPR
LCTFIAEGIRVNVVQKNLALLIYLMRMAKALLDNQTLYLEKYMHELVPSVMTCIVSRQLC
MKPDMDNHWALRDFAARLISQICKNYNTTTNGLQTRITRVFSRCLNTERTPLSSVYGAVA
GLSELGPEVTKVFVLPKLRALSDKIEQCMEGMNAYDKNAASHIKGLLLKTVAPVLKTLRN
PPDTVADYKMEYGYLGPQLQTAVVKARQAPPPPTTTLTAPIRAITPTTTRIIQQGTVPGM
SSVGPRTVVVNKPPTSGIGQQQPGQKVIIMTSRPPTPSQSATTETMGGVVKTAVVNAGGT
GLTTVTVNPSSLPAGSLTQNALTTSALTSQSSTQQTTKYVVVTGPNQGTIKTEIKQETDL
NQPQQPMDLT
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagactgtcaagtagctccgtcttttccaacggagtcaattaaagtgattgca
gagagcatagggatttcagcagtaggcgacgatgtagctaaagaattgtcagaagaagtc
accttcagattaaagatcttaattcaggatgggatgaaaaatatgcatcatggcaagaga
aaacgtttttcaactgctgattttgataatgtattaaaattaaaaaatatagagccactg
tatggtatccatcctggagaacatatccccttcagatttgcttctggtggaggacgtgaa
ctacactttttagaggataaagaacttgaaattaacgaaatggtatcatcgtcaacacca
cggcttccactacagatgacagtaaaaccacattggctggccattgaaggtgtacagcca
actataccagaaaatcccccaccaattactaaggatgctcaaaagaaggattctgtggat
ccagcagctaaactctcagctcagcaggagaacaaggatcaaaagcatattcatggccga
ggcatgaagagcattgagacagtaaaggtgaagcagttggctactcatgaactttctgca
gaacaacagctttattacaaagaaatcactgaagcttgcgttggttctgacgagcctaaa
agaggggaagcgcttcacagcttggcctttgacccaggtctccaccagatggtcccaagg
ttgtgtactttcattgctgagggcattcgggtgaatgttgtgcagaagaacctggctctt
ctcatctaccttatgcggatggctaaggctttgttagacaatcagactctttatttggaa
aaatatatgcatgaactggtaccatcagtgatgacatgcatcgtaagtcgacagttgtgc
atgaagccagacatggataatcactgggccttaagggattttgctgcccgccttatttca
cagatttgcaagaattacaacacaactacaaatggcttgcagactcgaattacaagggtg
ttttctcgctgtcttaacacagaaaggactcccctgtcttctgtatatggtgctgttgct
ggtttgtcggaacttggtcctgaagtgacaaaagtatttgtgttaccaaagcttcgggca
ttaagtgacaagattgagcagtgcatggagggcatgaatgcttatgacaagaatgctgct
tcccacatcaaaggcttgttactgaaaactgtagcaccagtactaaagacactgcgaaac
cctcctgatacagtagctgattataagatggagtatggatacctgggcccacagttacaa
acagctgtagtgaaggcacggcaagcacctccccctcccaccaccacactcacagcacct
atcagagccattacgcccactactactcgcatcatacagcagggtacagtgccggggatg
agtagtgtaggacctcgtacagttgtggtaaacaaacccccaacctcaggcatagggcag
cagcagccaggacagaaggtgatcattatgacttctcgacctccaacaccaagccagagt
gccacaactgagacaatgggaggtgttgtgaaaaccgctgttgtcaatgctggtggtaca
ggactcaccacagtgactgttaatccaagtagtcttccagcaggatctctcacgcaaaat
gccctcaccacttctgccctaacttcacaaagcagtacacaacagacgaccaagtatgtg
gttgtgactgggcccaaccaaggcaccattaagactgagatcaagcaagaaacagaccta
aaccagccacagcaacccatggatctgacataa
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