Penaeus monodon (black tiger shrimp): 119582538
Help
Entry
119582538 CDS
T08784
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119582538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119582538
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
119582538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
119582538
NCBI-ProteinID:
XP_037786788
LinkDB
All DBs
Position
16:complement(14320881..14340954)
Genome browser
AA seq
1046 aa
AA seq
DB search
MEVIESLINKADYLIEQSHEMLVQGGSASIQAQPLFRKLAAIYAEEAVKTPKLKSISLTH
KLLEKLVKRESLNCLVVNLYRGNEGYSLAIKMSSGLETETVRLSYEEDDFLSYIDNEKLP
PMLLDLLDESNIEIYYSGCVIAEIRDYRRTLDSSYDTRYVLLQPTSQSLAADIAAMTRDR
DWTPEEKLHLEAEIVKRTAPPLNLSPSPMVAIINNKLHQRKYKFSTVPIKRAARRFSQIA
QNRQKKSEEAPAPKCLRLHNFLSGKKDKRPIAKAITKPLIPMAMDEAPDLTVPENIDVSK
VARTYERPNYTTDNSLVFIEELVLETERGQGRIYHTKLTISQRKTDEVYFGELYVDRDYQ
EGKQNGSTCKFPLGTQQQVCRYIQQFKEIFTEDWRKSVKITHRVAGQAALSTFMPGTYKK
DIADSLKQSAAQQPGQQQIQVQAQQQPQQAQQQPQQQQPIQQQAAAAVAAAAVAAAGGPT
GVAPASSATTLAQHTQPNVIIVSNGEGVKKSVTVVTKPITVSSASTLTSLISAQPVQQAA
GPQQQVVVGRSVNLTNFLSGRATATAAGVVGMTGGLTGSAKLAVAVTTGPGASKISLPSL
PTQLNRPVPAYSQAVSLPKTQISSPSLTALLKGTVPANSQAVSIAKPQVVSLVGGVGDST
GHTKTVANTESSSSSTGSMSGLEALLAGTPSADNPAPQRGGPSLLERLSAQTSGSITAPA
TVSKDSGIVKVGSSVGAPSSQTNVGSSAAAAVLRSDSGSGGPPPNINIASLNLPGLNVAG
LQSLTANLGGLQNVQVSIPGLAVPISLSLNVPVTSSTGVILSSPPPSSVATKVSGSTAVT
SAATVMIASQPTLQQGQVVQLPIGQLSSSQLAAQLTKSTTQQGGSSSTIPVLQLQGVGGP
LFTPVRGGGAVSSAGGGVTSAGNSLTQQTVQVALPAGQGTGTVVSGGDTNLGVAHTTTVC
ATQASVVSLTAKQQLQLALQKSGPLSLPQLQLQQKLAALAKRQQHQLQNHQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggaggttatagaatctttaattaataaggccgattatttaatagaacaaagtcatgag
atgctggtccagggtggaagtgcttccattcaagcacagccactcttcaggaagctagct
gcaatttatgctgaagaagcagtcaaaacaccaaagctgaaaagcattagtttaacacac
aagcttcttgaaaaactagtgaaaagagaaagtttgaattgtctggttgtaaatctttac
cgaggtaatgagggctattctcttgccattaagatgtcttctggactggagactgaaact
gtaaggttgtcatatgaagaggatgattttcttagttatattgataatgaaaagttacca
ccaatgttattagatctgttagatgaatccaatattgaaatatattactctggttgtgtt
atcgctgaaataagagattacagaagaactctggactcttcgtatgatactagatatgtt
cttttacaaccaacgagtcagtcattggcagcagacatagcagcaatgacacgagaccga
gactggaccccagaggaaaaactgcatcttgaagctgaaattgtcaagcgcactgcccct
cccctaaatctctctccgtcacccatggtcgcgattataaataataaacttcatcagcgt
aaatacaaattctcaacagtccctattaaaagagcagctagaagatttagtcagattgca
cagaatcgccagaagaaatctgaagaagctccagcaccaaaatgtttaagattacataat
ttcctcagtgggaaaaaggacaaaagacccattgccaaagcaataacaaagccacttatt
ccaatggccatggatgaagctccagatttaactgttccagaaaatatagatgtttcaaaa
gtggcgcgtacatatgaacgaccaaattatacaacagataactctcttgtattcattgag
gaattggtgcttgagactgaaagaggacagggaaggatctaccacacaaagctgacaata
tctcaaaggaagacagatgaggtgtattttggggaattgtatgttgaccgtgattaccag
gagggaaagcaaaatggatccacatgcaaatttccattgggaacccagcagcaggtgtgt
cgatacattcaacaattcaaagaaatatttactgaagactggaggaagagtgttaaaata
acacatagggtggcagggcaagcagcactctccacattcatgcctgggacctataagaag
gatatagctgactctctcaaacagtctgctgcacagcaacctggccagcagcagattcaa
gtgcaagcacaacaacagcctcaacaagcacagcagcaaccacaacagcaacaaccaata
caacagcaggcagcagctgcagtagcagcagcagctgtagcagctgcaggaggacctaca
ggagttgctcctgcttcctctgctaccacattggctcagcacacacagcctaatgtcatt
attgtttcaaatggtgaaggtgttaaaaagtctgtcactgttgtaacaaaacccataact
gtgtcatcagcatcaacacttaccagccttatatcggctcagcctgtccaacaagctgca
ggcccacagcaacaagtggtagttgggcgcagtgtaaacctaacaaacttcttgagcgga
cgagcaacagccaccgcagctggagtggtgggtatgacaggaggcctcactggatcagca
aaattagcagttgctgttacaacaggtccaggggcatcaaaaatctctctcccatcctta
ccaacccaactaaatcgtccagttccagcatattcacaggcagtgtctttacccaaaact
cagatctcatcgccttccctgacggcacttctgaagggcactgtgccagcaaactctcag
gcggtctccatagcaaaaccacaggttgtgagcctagttggtggtgtaggtgactctaca
ggacatactaagactgtggccaatactgagtcctcttcctcctccactggcagcatgtct
ggtctggaagcattacttgcaggaaccccttctgctgataatcctgctccacagagaggt
ggtccatcacttctggaacgtctttctgctcaaacctctggttctatcactgctcctgct
acagtaagtaaggacagtggaattgtgaaggttggcagtagtgtaggggcaccttcaagt
cagactaatgttggaagttcagcagcagcagcagttctgcgaagtgacagtggcagtggt
ggtcctcctcccaacatcaatattgccagtcttaaccttcctggtctcaatgtagcagga
ctgcagagtctcacagcaaacttaggtggactacaaaatgtacaagtctcaatcccaggc
cttgctgttccaatttcactctctttaaatgttcctgtcacaagttctactggtgtgata
ttatcatcaccaccaccttcaagtgtggcaacaaaggtttcaggctcaactgcagtaaca
tcagctgcaacagtaatgattgctagccaaccaactcttcagcaagggcaagttgtacaa
ctaccaataggccaattgagttcatctcagttggcagcacagttaactaagtcaaccaca
cagcagggagggtcctcttcaactatacctgtattgcagctgcagggcgttgggggcccc
ttgttcaccccggtacgaggaggaggtgctgtgagtagtgcaggaggaggggtaacatct
gcaggaaactctctcacacagcaaacagtgcaggttgctctcccagcaggacaggggact
gggactgtagtgtcaggtggtgatacaaacctaggtgtagcacatacaacaactgtatgt
gctactcaggcttctgttgttagtttaactgcaaaacagcagctccagttggcattgcag
aaatcaggtcctctcagccttccacagctacagttgcaacaaaagttagcagcacttgcc
aaacgtcaacagcatcagttgcaaaaccatcagcagcaacagcagcaacaacagcagcag
cagcaacagcagcagcagcaacaacaacaacagcaacaacaacagcaacaacaacagcaa
caacaacaacaacagcagtag
DBGET
integrated database retrieval system
