Penaeus monodon (black tiger shrimp): 119582871
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Entry
119582871 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin assembly factor 1 p55 subunit-like
KO
K10752
histone-binding protein RBBP4
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03082
ATP-dependent chromatin remodeling
pmoo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119582871
03083 Polycomb repressive complex
119582871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119582871
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
119582871
Histone modification proteins
HAT complexes
HATB complex
119582871
HDAC complexes
Sin3A-HDAC complex
119582871
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119582871
PRC2.2
119582871
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
119582871
Heterochromatin formation proteins
Other heterochromatin formation proteins
119582871
Chromatin remodeling factors
NuRD complex
119582871
NuRF complex
119582871
NuRF complex (fruit fly)
119582871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
119582871
NCBI-ProteinID:
XP_037787299
LinkDB
All DBs
Position
16:complement(46673261..46681056)
Genome browser
AA seq
403 aa
AA seq
DB search
MEEKHPFLYDLVMTHALEWPSLTXQWLPDVTRPDGKDFSIHRLILGTHTSDEQNHLLIAS
VQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATK
TPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTIC
LWDINATPKENRIIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRANNTN
KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEVFQV
QWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWN
PNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPASELESAAS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaacacccctttctgtacgacctggtgatgacccatgccttggaatggccc
tccctcactngccagtggctgcctgatgttacaagacctgatggcaaagacttcagcatt
caccgactgatactaggaacacacacaagtgatgaacagaaccatctcctcattgcctca
gttcagctgccaaatgaagatgcccagtttgatgcctctcactatgacaacgaaaaagga
gagtttggtggctttggctcagtcagtggaaagatcgaaatagaaattaaaatcaaccac
gagggagaagtaaaccgtgctcgctacatgcctcagaatccatgcgtcatagccaccaaa
accccttcaagtgatgtacttgtctttgactacacaaagcatccatcaaaaccagatcca
tctggggagtgccatcctgacctaaggttacgtggccatcagaaggaaggatatggtctg
tcttggaatcctaatctgaatgggtatctcctgagtgcatcagatgatcacactatctgc
ttgtgggacattaatgcaactccaaaggaaaacagaataattgatgcaaaaaccatattc
acaggacacactgctgtagtggaggatgtcgcctggcacctcttgcacgagtccctcttt
ggttctgtggctgacgatcaaaagctcatgatctgggacactcgtgcaaacaacactaac
aagccatcacacacagttgatgcccatacagcggaggtgaactgcctctccttcaatcct
tactctgaatttattcttgccactggaagtgcagacaagacagttgccttgtgggacctg
cgcaacctcaagctgaaactccactcatttgagtcgcacaaagatgaggtcttccaggtt
caatggtcacctcacaacgagacgattctggcaagttcaggcacagaccgtcgcttgcat
gtttgggatctgagcaagattggtgaggagcagagtgctgaggatgctgaagatggacca
ccggaattattgttcatccacggaggccacactgccaagatctccgacttctcctggaac
cccaacgaaccatgggttatttgttctgttagtgaagataatatcatgcaggtgtggcag
atggcagaaaacatctacaatgatgaagaaccagaaactccagcctctgagcttgagtct
gcagcatcttaa
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integrated database retrieval system
