Penaeus monodon (black tiger shrimp): 119582927
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Entry
119582927 CDS
T08784
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
pmoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119582927
03015 mRNA surveillance pathway
119582927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119582927
03041 Spliceosome [BR:
pmoo03041
]
119582927
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119582927
Spliceosome [BR:
pmoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
119582927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
119582927
NCBI-ProteinID:
XP_037787367
LinkDB
All DBs
Position
16:7827508..7839680
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AA seq
818 aa
AA seq
DB search
MADAGFFRGTSAEQDNRFSNKDKKLMKEMKFSESLTKKVDMTKVRLEVIKPWVTEKITTI
LGIEDDVVIEYVFNQLEAEKNPDPRKMQIMLTGFLNGKNARIFMGELWDLLISAQASPSG
IPKQFLDQKKEELKKKMEEEERLQKIQEARRERDKEKEKDKERDRDRDKDREKDRRDRRS
RSRDRSSRGSRRDRSRSPRSKDDKKESKKESSRWDKKDESSKNKEEKKETNGDVSAKEKS
AATKSPKQEPSSPKQEATVKQEKPEISPKKERSERDRDRGERGHSRDRKSRRSRGRSPKK
EEDRRRRGSSRKRSPSPRKHSPIVRKRSPSPRKRSASPRKRSPSPRKRSASPRKRSPSIR
KRSVSPHKRSSSPRPKIRRRTRSPSSNSESSSSSRSRSRSAPRNKEDDFEIHRKEDSVLK
KRQYRSNRDPSSSEDEGQARNFTGDHRGAGSPRRRSPPRYKRSPSPPRRGRRSPSPRYRR
RYVFQMIQLPFHCTLAVQNLEAVSTIDYQARFCTGGPKSSLDVCGPKRSPDVSSVTLVRR
KQLYAQTWRMGQIICKPQKSVSPRGRRSPSPRGRRSSSPRRRPMSPPQSRYRRSHSRSPV
RKKHGSASHSPRRGGPPPPAAADKKHNISNASRLMQLANYSADTIKEVQYKLTKKNENNH
PASGSDESDSDDGRMSRRVPKRRSRSASVSQSPRQRRRMDSGSVDGSEEEEEDEGSSSRE
SSPVEKKKKKKKKKHKKKDSSSESEGSETEEKKKKKKEKKKKHKKHKKQKKHKKHRHEES
ESESGESMGGEELERKLREKALLSMKRQERSSAASESE
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgctggcttctttcgcggtacatctgcagaacaagataaccgatttagtaat
aaagacaagaagttaatgaaagagatgaagttctctgaaagtctgacaaaaaaggtggat
atgactaaagtgcgtttagaagtcatcaagccatgggtcacagagaagatcacaactata
ttaggtattgaagatgatgtcgtcattgaatatgtcttcaatcagctagaagcagaaaag
aacccagatcctaggaaaatgcagatcatgttgactggtttcctgaatggtaagaatgcc
agaatctttatgggagaactgtgggacctcttgatctccgcccaagcaagtccatcgggt
atacccaaacagttcctagatcagaagaaagaagagctgaaaaagaaaatggaggaagaa
gagaggctacaaaagatacaagaggccagacgagaaagagacaaggaaaaggaaaaagat
aaagagagggaccgagatcgtgataaagacagagaaaaggatcgcagagacaggaggagt
cgtagcagagacagatcgtcacgtggatcacgaagagacaggtcacgttctcctcgttca
aaggatgacaagaaggaatccaaaaaggaatcttcaaggtgggacaagaaggatgaatca
agtaagaataaagaagaaaagaaagaaactaatggtgatgtttcagccaaggaaaagtct
gcagctacaaaatcccccaaacaggagccttcttcacctaagcaggaggctacagtcaaa
caggaaaagccagagatttctccaaagaaagagcgtagtgagagggacagagacagaggg
gaaagaggacactcaagagacagaaaaagtagaagatcaagaggaagatcaccaaagaag
gaggaagataggaggcgcagaggctcttccagaaagcgttctcctagtcctcgcaagcac
tcacccattgtgcgcaaacgatcacccagtcctcgcaaacgatcagctagtccacgcaag
agatcacctagtccgaggaaaaggtcagccagtcctcgcaagagatctcctagtatccgt
aagcgttcggttagtccacacaaaaggtcgtcgtctcctaggcccaagatacggaggaga
acacgctctccaagctcaaattcagagtcttccagcagttctcgatcacgcagtcgttct
gctccaagaaataaggaagatgattttgagatacatcgcaaagaagactcagttctcaaa
aagcgtcagtacaggtcaaatcgagacccatcaagttcagaagatgagggacaggcccgt
aactttactggtgaccatagaggggctgggtctccacggcgtaggtcacccccacgttat
aagaggtctccctcaccacccaggcggggaagaagatcaccctctcctagatatcgtcgc
aggtatgttttccagatgatccaattaccttttcactgtactcttgcggtacaaaaccta
gaggcagtaagtactattgattaccaagcaagattttgcacaggaggtcccaaatcctcg
ttagatgtctgtggtccaaagaggagcccagatgtgtctagcgtcacactagtccgcaga
aaacagttatatgcacaaacctggagaatgggtcagatcatctgcaagcctcaaaaatca
gttagcccaagaggaagacgttcgcctagtccaagagggaggcggtcatccagtccacgt
agacggcctatgtctcctcctcagagcagatatcgccgatcacactcgcgatcacctgtc
cgtaagaagcatggcagtgcatcccactctcctcgcaggggtggtcctcctcccccagca
gctgcagacaaaaaacacaatataagcaatgctagtcgactgatgcagcttgccaactac
tcagcagacacaatcaaggaagtccaatataagcttacaaagaagaatgagaataatcat
cctgcttccggctctgacgaatctgatagtgacgacggcagaatgtcccgcagagttcct
aagaggagatcacgatctgcatccgtgtctcagtctccacggcagaggaggagaatggac
tcaggatcagtagatggatcagaggaagaggaagaggatgaggggtcttcaagcagagaa
tcatcccctgttgaaaagaaaaagaagaagaagaagaagaagcacaagaagaaggatagc
agtagtgaatctgagggatctgaaactgaagaaaagaagaagaaaaagaaggaaaaaaag
aagaaacacaagaaacataagaagcagaagaagcataaaaaacacagacatgaggagtca
gagagtgaatcaggagagagcatgggaggggaagagttggaacgtaagcttcgagagaag
gccctcctttccatgaagcgtcaagagagatcatctgctgcttcagagtcagagtag
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