Penaeus monodon (black tiger shrimp): 119583358
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Entry
119583358 CDS
T08784
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo04140
Autophagy - animal
pmoo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119583358
04148 Efferocytosis
119583358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmoo04131
]
119583358
Membrane trafficking [BR:
pmoo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119583358
Hops complex
119583358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3H2C3
Beta-prop_IFT140_1st
zf-RING_5
TPR_GEMI5
TPR_Vps41
Beta-prop_EML_2
WD40
FakA-like_M
zf-Nse
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
119583358
NCBI-ProteinID:
XP_037787759
LinkDB
All DBs
Position
17:35626220..35647089
Genome browser
AA seq
1138 aa
AA seq
DB search
MAALLQWRKFNFFDVKANIDGGKLAEAVKGAEVTCTAAGRGHVYIGDSTGCVHSLTRQLK
LDSFQAFDRAVKSITAFDHTSIIITVADKNDGPSEIKVWAPDKADIHGQPPCLRTLSPDP
RPNQAGSRASSGPNQAGKVPKVTALAVHPNLSLMAVGFQDGSVMLYRGEVSRDRGSKHRV
LLTVSSSITSLHIRHNTRATHLFVTTKNNIFCINCTARDKETTVELDSVGCEPGCATLAD
GRHEHHFLVARPDAIYSYTSDSRGSCYVFEGEKSMVAWFRGYLIVGTIDKGLPASRASER
SITVYDLTNKLVALSTKVRGLAGVVGEWGGLYLVTTEPAMVHMSEKDLQSKFQLLFKKNQ
FDIAISLAKTQCCDQEEVAEILRQYGDWLYSKGNHPAAMDQYIKTIPHLEPSYVIRKYLD
TQHIHNLTTYLQALHRSGSATADHTSLLLNCYTRLRDTQQLDEFIMSKDGAVDCDVELGV
RVCRSAGYYDHALALAAKHKLHHHHLAILIDDKKDYVAALRYIKTLDFEEAKSSVMRYGS
VLLNHVADETTELLIRLCTDYKPSNTPLIKEGSLDGYLTPEEPVYGDPEEFEYLLVGHSE
QAIAFLEKMATIPGKLSDKLYTTLLAEYLHQYGLAPEGQEQVVLGEKIMELLRNTESGCS
RDHALLLCDKHQFYDGKLLLWEQAGMSLKLLTSPDSTAPPDPQYLMTCLNNIEEKTLLPP
LEVVDQLAASPHITLGQGGITPSATQFTATKCNICNNELELPSVHFLCRHSFHQHCFESY
SESDVECPVCLPENRKMLEVIKAQETHRSQHDQFHEQLERCTDSFSVVADYLGRGVFTHL
HTLATMYPSLNTTKSMQSKVAPPKASAFVEDATDTGSEARVRAAELPKQNTGGVVPEPES
RLRVLEKVTQGPTGVGSEGRLRMGERRGQGILEIESESRLRAEGRKMAQTSSEPASQAMP
EGRVRQDKSSAVITSPTEGRMRSQITSSVTVPVAESRIRSNDSARMGGAMKGAGSKYGSS
LHDHITPSPPTASRDKSPKRPSPVESISTALSSTHISRSTQKVLDNPFEESDADTNNPFG
DDYETEQMGNNPFEDDYDESKNPFASDSPAHKSPDEKNPFADDPSKDYESNLNPFGEA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctacttcagtggaggaagttcaacttctttgatgttaaagcaaatattgat
ggagggaagctagcagaagctgttaagggtgcagaggtaacatgcacagctgctggtcga
ggccatgtttacataggggattcaactggctgtgttcacagcctcaccagacagctgaaa
cttgactcctttcaagcttttgacagggcagtcaagtctatcacagcctttgaccacacg
agcatcatcattaccgttgctgataagaatgatggaccctcagagatcaaggtctgggct
ccagacaaggctgatattcatggtcagccaccttgtctcaggacactatccccagacccc
aggccaaaccaggctgggagtcgggctagctctggccccaaccaagcaggaaaagtgcct
aaggtcacagcactagctgtccatcccaacttgtccctcatggctgttggtttccaggat
ggctctgtcatgctttatcgaggtgaggtgagtcgagatcgtggcagcaaacacagagtc
ttgctgacagtctccagcagcattacatctctccatatccgacataacacacgtgcaact
catctctttgtcaccacaaagaacaatatcttttgtattaattgcactgctagagataaa
gaaacaacagttgagctagattctgtgggttgtgagcctggttgtgctacactggcagat
ggacgtcacgaacatcatttcttagtggctagaccagatgctatatatagttacacaagt
gacagccgtggttcatgctatgtgtttgaaggagaaaagtccatggtagcatggtttaga
ggatacctcatagttggcactattgataaaggattgcctgctagcagggctagtgaaaga
agcatcactgtttatgatctaaccaacaagttggtggccctgagcacaaaggtgaggggg
ttagcaggggtcgtaggggaatggggaggcctctacctggtcacaacagagcctgctatg
gtgcatatgtcagagaaagacctccagagcaagttccaactactgttcaagaaaaatcag
tttgatattgcaataagcctggcaaaaacacagtgctgtgaccaagaggaggtggctgaa
atcctgcgtcagtatggagattggttatacagtaagggcaaccatccagctgcaatggac
caatatatcaagacaatcccacatcttgaaccatcatatgttataagaaagtatttagat
actcaacatattcacaatttgacaacatacctccaagctttgcaccgttctgggtcagcc
acagcagatcatacaagtcttctactgaactgttatacacgcttgagagacacccaacag
ttggatgagtttattatgagcaaagatggggctgtggattgtgatgtggagcttggagtg
cgtgtgtgccgcagtgccggatattacgatcatgctcttgcccttgcagctaaacacaag
ctacaccatcatcaccttgctatcctcattgatgataaaaaggattatgttgcagcatta
aggtatattaaaactctggattttgaggaagctaaatcaagcgtaatgaggtatggatca
gtgttgctgaatcatgtggctgatgagacaacagagcttttgataagactttgtactgac
tacaagccaagcaacacaccccttatcaaagagggttcattggatggctacctcacccca
gaggaaccagtgtatggggatccagaggaatttgagtaccttttagtgggccatagtgag
caagccattgcattccttgagaagatggcaactatccctgggaaactgtcagacaagctc
tatacaaccctcttggcagagtatttgcaccagtatggactagccccagaaggtcaggaa
caggtggtactaggtgaaaaaattatggaattgttgcgtaatacagagagtggttgtagc
cgtgaccatgccctgctcttgtgtgataagcatcagttttatgatgggaagcttcttctg
tgggaacaagcagggatgtcattgaagctacttacctccccagattctacagctccccct
gacccacaatatctaatgacttgcctaaacaacatagaggagaaaaccttattaccacca
ctggaggtagttgatcagctggctgcatccccacacatcacgctaggacagggggggatt
acccccagtgcaacacagtttacagctactaaatgcaacatttgcaacaatgaattagag
ctgccatctgtccactttctctgcagacattccttccatcagcattgctttgaaagttat
agtgagagtgatgtcgagtgtccagtctgtctgcctgaaaataggaagatgttagaagtc
atcaaggctcaggaaacccaccgcagccaacatgatcagtttcatgaacagctggaaaga
tgtactgattccttttccgtggttgctgattacctgggtcgaggggtgttcactcatctc
cataccttggctaccatgtatccttcgctcaacaccacaaaaagcatgcagagtaaagtt
gcacctccaaaggcatccgcttttgtagaggacgcgacagacacaggttcagaagctaga
gttagagcagcggagcttcccaagcaaaatacaggtggagtagtcccagagccagaatcc
agattgcgagtgctggagaaagtcacccagggtcccacaggagttgggagtgaaggtcgc
ctgcggatgggagaacgtcgaggacagggtattcttgaaattgagtctgaaagtagactg
agggccgaagggagaaaaatggctcaaacttccagtgagccagcttcacaagccatgcct
gaagggagagtaagacaggacaagtccagcgctgtcataacaagtccaacggaaggtagg
atgagatcacagataacatcaagtgtaactgtcccagtggctgagagtcgcataaggtca
aatgactctgcaaggatgggtggcgctatgaaaggagctggtagcaagtatggttcttcc
ctccatgaccacatcacaccatcacccccaacagcttccagggataaaagccccaagagg
ccttcaccagtggaaagcatatctacagcactcagtagcacacatatttctcgaagcact
cagaaggtattagataatccatttgaagagtcagatgcagataccaataatccttttgga
gacgactatgagacagaacagatgggaaacaacccatttgaagatgactatgatgagtct
aaaaatccttttgcatctgattccccagcccacaagagtcccgatgaaaagaatcctttt
gctgatgatccaagcaaggattatgaatccaacttgaatccatttggggaggcataa
DBGET
integrated database retrieval system
