Penaeus monodon (black tiger shrimp): 119583477
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Entry
119583477 CDS
T08784
Name
(RefSeq) F-box/LRR-repeat protein 20-like
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoo04121
]
119583477
Ubiquitin system [BR:
pmoo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119583477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box
LRR_8
LRR_At1g61320_AtMIF1
F-box_4
Motif
Other DBs
NCBI-GeneID:
119583477
NCBI-ProteinID:
XP_037787913
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All DBs
Position
17:3881034..3898437
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AA seq
437 aa
AA seq
DB search
MKMMNHNSMNRLELTKVFSDDEALINKKVPRELLLHVFSYLDVVSLCRCAQVSQYWHVLA
LDGSNWQRIDLFNFQTDIEGRVVENIGKRCGGFLKQLSLRGCQSVNDAALVTFAEKCNNI
EELNLNLCKNITDTTCTALSRHCPRLVKLDLDSCSQITDISLKALSDGCPNLEWINVSWC
ENIAQNGVDALAHGCPKLKGFVGKGLKSLTDPALISLAQYCKNLEHINLHSCSAISDRGV
IALAENCVMIRYLCLSNCTHLTDTSLVVLSQHCTHLETLEVAACSQFTDNGFQALARTCH
VLEKIDLEDCVLITDATLSHLASGCPRLEKLSLSHCELITDEGIRHLGVSACSTEHLAVL
ELDNCPLISDASLDHLLSCHNLQRIELYDCQQITRAGIKRLKSHLPNIKVHAYFAPQTPQ
PAEGRSRQRYCRCCVIL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatgaaccacaacagcatgaatagattagagttgactaaagtgttttcggat
gatgaggccttgataaacaagaaagtaccaagagagctcttattacatgttttttcatat
ctggatgtggtatcgctgtgccgatgtgcgcaggtgtctcagtactggcatgtcttagca
cttgatggctcaaactggcaacgtattgatctctttaatttccagacagacatagagggt
cgtgtggtcgaaaatatcggcaaacgatgtgggggtttccttaagcagttgtccctgagg
ggatgccagagcgtgaatgacgcagccttggtcacatttgcagagaagtgcaacaatatt
gaagaactaaacctgaacttgtgcaagaacatcacagacacaacatgcacagctctgagc
agacactgtccccgcttggtgaagctggaccttgactcctgttcccagatcacagacata
tccctcaaagcactcagtgatggttgccccaacttggagtggataaatgtgtcctggtgt
gaaaatatagctcagaatggtgttgatgccttggctcatggctgccccaaacttaaaggt
tttgttggtaaaggattgaaatccctcacagaccctgctctcatatcacttgctcagtat
tgtaaaaatcttgaacacatcaaccttcacagctgttctgcaatcagcgacagaggtgta
attgccttggcagaaaattgtgtaatgataaggtacttgtgtctgagcaactgcacgcat
ctaacagacacaagcctggtagttctctcccaacactgtacacacctagaaacactggag
gtggctgcttgctcacaattcacagataatggattccaggctctagcacggacatgtcat
gtgctggagaagattgatctggaggattgtgtgcttatcacagatgccacactaagccat
ttggcatctggatgtcctcggcttgaaaaacttagtctttctcattgtgaacttataaca
gatgaaggtatacggcaccttggggtatccgcatgttctactgaacacttagctgttctg
gaacttgataactgtccacttatctcagacgcctctttggaccacctcctctcgtgccac
aatttacaacgcattgagctctatgactgccagcaaatcacccgtgcaggcatcaagaga
ctcaagagccacctacccaatataaaagtgcatgcatacttcgccccccagacaccacag
cctgcagagggccgttcaaggcaacggtactgtcggtgttgcgtcattctctga
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