Penaeus monodon (black tiger shrimp): 119584216
Help
Entry
119584216 CDS
T08784
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB-like
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03022
Basal transcription factors
pmoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119584216
09124 Replication and repair
03420 Nucleotide excision repair
119584216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119584216
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119584216
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119584216
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119584216
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119584216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
TniB
DSPn
Motif
Other DBs
NCBI-GeneID:
119584216
NCBI-ProteinID:
XP_037788655
LinkDB
All DBs
Position
18:9116590..9122827
Genome browser
AA seq
790 aa
AA seq
DB search
MPKKHKFHDKGTKRSRRDEGFSDDEESNELEGVPQASKQNVEERGQQTTPKDQYGAFDYR
KEVELRDDHESRPLWVASNGHIFLESFSPVYKHAKDFLITISEPVCRPEHIHEYKLTAYS
LYAAVSVGLQTHDIIEYLKRLCKTTLPPGICEFIQSCTLSYGKVKLVLKKNRYYVESDFP
DVIQKLIKHPVIYDCMLRPNEGVTSSERQKSQAIMFTSHQAQMAGGTDISKPNSNPEEGT
NGEAKEGEAVPEDINDFYDKFEKADEEEEEDKNLKTLSFEVNQDKIETLQKTCIGLDYPL
LAEYDFKNDTVNEDIKIDLKPSAVLRPYQEKSLRKMFGNGRARSGIIVLPCGAGKSLVGV
TACCTVNKKALVLCNSGVSVEQWKQQFKMWSTATDDMICRFTSDAKDKPFNAGILITTYA
MISHNQKRAYEAEQTMNWLKEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKLGLTATLV
REDDKIADLNFLIGPKLYEANWLELQKEGFIARVQCAEVWCPMTPEFYREYLTGKVSDQK
IRLLCAMNPNKFRTCEFLIKYHENRNDKIIVFIDEVFALIHYAKTMGKPYICGKTGQKER
MAIIQNFKLNPKVNTIFFSRVADTSFDIPEANVLIEISSQGGSRRQEAQRLGRILRAKKG
AIAEVYNAFFYALLSQDTREMGYSRKRQSFLINQGYAYQVVTPAQMVGMEEAQLHYNTRE
EKVALLEQILAASESDMYEEGLGGERAVGGSMRRAGNMGSMSGADDQIYGERRKSSKKDH
QHFLFKKYRS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaacacaagttccacgacaaagggaccaagcgttctcgacgagatgaaggc
ttttccgatgatgaagagtctaacgaactggagggtgtcccacaagcatccaaacagaat
gttgaggaacgaggacagcaaaccacgccgaaggatcagtacggtgcctttgattaccgc
aaggaggtagagcttcgagatgaccacgagagccgacctctttgggtagccagcaatggc
catatcttcctggaatctttctcacctgtctacaaacatgctaaggacttcctgattacc
atctcagagcctgtatgcagaccagaacacattcatgaatacaaattaacagcatactct
ctgtatgcagctgtgagtgttggtcttcaaactcacgacatcatagaatatctgaaaaga
ctttgcaaaaccacacttcctcctggcatttgcgagtttattcagagttgtactctctca
tatggtaaagtcaaacttgtgttgaaaaagaatagatattatgtggagagtgatttccca
gatgttatccagaaactcattaaacacccagtcatttatgactgtatgctgagaccaaat
gaaggagtcacaagttctgaacgtcaaaagtcacaggccattatgttcacgagtcatcaa
gcgcaaatggctggtgggacagatatttccaaacccaacagtaatccagaagaaggaacc
aatggtgaagcgaaggaaggagaagcagtccccgaggatatcaacgatttttatgataaa
tttgagaaggcagatgaagaagaagaagaggataaaaatctaaaaactttgtcatttgaa
gtcaaccaagataaaattgagaccctacaaaaaacttgcattgggctggattacccactc
ttggccgagtatgactttaagaatgatactgtcaatgaagatattaaaattgatctcaaa
ccttcagccgtcttacgaccatatcaagaaaagagcttgaggaaaatgtttggtaatgga
agagcaagatctggtattattgtgctcccttgtggtgctggcaaaagtttagtgggtgtt
acagcatgttgtacagtgaataaaaaggctttagtactttgtaactcaggagtgtctgtt
gaacagtggaagcaacagttcaagatgtggtcaactgcaactgatgacatgatttgcaga
tttacctctgatgccaaagacaaacctttcaatgcaggtattttgattactacatacgct
atgatatcccacaaccagaaacgagcctatgaagcagagcagacaatgaattggctcaaa
gaacaggaatggggtattatggttttagatgaagtacatactattcctgcaaaaatgttc
agaagagtccttaccatagtccagtctcattgtaagcttggcttaactgccactttggtc
cgagaagatgacaaaattgctgatctgaatttccttattgggccaaaattgtatgaagcc
aattggcttgagctgcagaaggaaggattcattgcaagggtccagtgtgcagaggtatgg
tgccctatgacaccagaattttatagagagtatttaacaggaaaggtatctgaccagaaa
attaggcttctttgtgctatgaaccccaacaaatttagaacttgtgaatttcttatcaaa
taccatgagaacagaaatgacaagattatagtgtttattgatgaggtttttgcactgatt
cattatgccaaaactatgggaaaaccttacatctgtggtaagacaggtcagaaggaacgt
atggccatcattcagaatttcaaattaaatcccaaagtcaacaccatattcttcagtcga
gtggcagatacttcctttgacattcctgaagcaaatgtcttgattgagatctcatctcag
ggaggatctaggcgacaggaggcccagaggttgggtcgtatcttgagagctaaaaagggt
gccatagcagaggtttacaatgccttcttctatgccttgctttcccaagacacgagggag
atgggatactcgcgcaaaaggcagagtttcctcatcaatcagggctacgcttatcaggta
gtcactcctgcacagatggtaggaatggaagaggcgcagttgcattacaacaccagagag
gaaaaagtagcattgcttgaacagatccttgctgcctccgaatctgacatgtatgaggag
ggcttgggaggggaacgtgctgtaggcggttcaatgcgtcgagcgggaaatatgggttca
atgtcgggggctgatgaccagatctatggtgaaaggaggaagagttccaagaaggaccac
cagcatttcctcttcaagaaatacagatcctag
DBGET
integrated database retrieval system
