Penaeus monodon (black tiger shrimp): 119584276
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Entry
119584276 CDS
T08784
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03030
DNA replication
pmoo03410
Base excision repair
pmoo03420
Nucleotide excision repair
pmoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119584276
03410 Base excision repair
119584276
03420 Nucleotide excision repair
119584276
03430 Mismatch repair
119584276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoo03032
]
119584276
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119584276
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119584276
DNA replication proteins [BR:
pmoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119584276
DNA Replication Termination Factors
ELG1-RFC complex
119584276
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119584276
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119584276
Check point factors
HRAD17(Rad24)-RFC complex
119584276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_2
DUF87
Sigma54_activ_2
ABC_tran
AAA_24
Motif
Other DBs
NCBI-GeneID:
119584276
NCBI-ProteinID:
XP_037788732
LinkDB
All DBs
Position
18:complement(13114444..13124347)
Genome browser
AA seq
355 aa
AA seq
DB search
MSLWVDKYRPRELSKLDFHLEKGAHLKKLVEGGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQNFQTPSKKKLEIVTIASNYHIEVNPSDVGIYDRVVIQELIKTVASSQQ
LDTSGQREFKVVVLNEVDKLTKDAQHALRRTMEKYMATCRLILCANSTSKVIPAIRSRCL
GVRIPAPTVEDVVKVLQAVCKKEGLSLPTELAKRIADKSNRNLRRAILMCEACRVQQYPF
SPQQDISIPDWEVFLQETAAKIVEEQSPNRLLDVRGRIYELLTHCIPPEVIFKGLLKELV
RNCDGELKCEVTRLAAYHEHRLNLGSKAIYHIEAFIAAFMAIYKKFLEDSMSAMF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggataaatatcgcccacgagagctttccaagttggattttcacctg
gagaaaggtgcacatctcaagaaattggttgaagggggtgattttccacacctcttggtg
tatggaccatcgggtgctgggaagaaaactcgaattatgtgcctcctacgtgaactatat
ggcccaggtgtggaaaagctaaggatcgagcatcagaattttcagaccccttccaagaag
aagctggagattgtaacaattgccagtaattatcacatagaagtgaatcccagtgatgtt
ggcatctacgacagggttgttattcaggaactcatcaagactgtggcatcttcacagcag
ctggatacaagtggtcagagagaatttaaagtggttgtgctaaatgaagttgataaactt
accaaagatgctcagcacgccctccgtcgtactatggagaagtacatggcaacttgtagg
ctgattctctgtgcaaattcaacatccaaggtcattccggctatccgtagtcgttgtctt
ggggtgaggattccagcccccacagtcgaggatgttgttaaagtcttacaggctgtgtgc
aagaaggagggcttgtcattaccaactgaacttgccaaaagaattgctgacaagtcaaat
cgcaacttaagacgtgccatattaatgtgcgaggcttgtagagtccaacaataccccttt
agtcctcaacaagatattagtatcccagattgggaagtgttcttacaagaaacagcagca
aagattgttgaggaacagagtccaaacagattgttggatgttcgaggaaggatttatgag
ctgctgacacattgcatacctccggaggttattttcaaaggcctgttaaaggaattggtc
agaaattgtgatggtgaactgaagtgtgaagtgacaagactagctgcctatcatgaacac
cgcctgaatctcggttcaaaggctatataccacatagaggcctttattgcagcattcatg
gctatttacaagaagttcttagaagacagtatgtcagccatgttttga
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