Penaeus monodon (black tiger shrimp): 119584508
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Entry
119584508 CDS
T08784
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119584508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119584508
Spliceosome [BR:
pmoo03041
]
Complex B
Other components
Prp19-related factors
119584508
Complex C
119584508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
RRM_YTH1
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
RRM_3
zf-CCCH_12
FYVE
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
119584508
NCBI-ProteinID:
XP_037789087
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All DBs
Position
18:complement(41052586..41062719)
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AA seq
491 aa
AA seq
DB search
MAMSKSTNTYNRQNWEDSDFPILCQTCLGDNPYVRMMRDRYGKECKICTRPFTVFRWCPG
ARMRFKKTEVCQTCAKIKNVCQTCLLDLEYGLPTQVRDSALSLADEMPKSDVNKEFYIQN
MEKQMAATSDGSTAGGVLGKTKTHSEMLLRLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLLKRAAAMPRLEPPEDKSITTLYVGNL
GDRIGEKELRDHFYQYGELRSVNVVAKQQYAFVQFTTRSAAELAAERTFNKLIIQGRRLN
IKWGRSQARQGGLGIGGIEGLEGEEVAPQPLEPVPGLPTLPPPPEELQNNFFNLPSQAAS
IPLPPGQAPAVAGAPSIRPPMPPGQAPPRPPVPPPGSLPGGPPPVSGPLGPRPPPGVPPA
PPGHLPPLQPPPFFPPHLRAPLRPPPGVRPPTYFPQPPPIPGVGPPPPLTHGIIHYPSQD
PTQMGANPDKK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtccaagtcaaccaacacttataatcgacagaactgggaagattcggatttt
ccaatcctgtgtcagacatgcctgggcgacaatccttatgtgcggatgatgagggacaga
tacggcaaggagtgcaagatatgtacacgacccttcactgtctttagatggtgtccagga
gcgagaatgagattcaagaagacagaggtgtgccagacatgtgccaaaatcaagaatgta
tgccagacctgccttctggatctggagtatgggctccccactcaggtacgagactcagct
cttagcctagcagatgagatgccaaaaagtgatgtcaataaagagttctacatccagaac
atggagaaacagatggcagctacatctgatggtagcacagcaggaggagttttaggcaaa
acaaaaacacattcagagatgctcctgcgtctggctcgtacaacaccatactacaagcgg
aaccggccccacatttgctcattctgggtgaagggtgaatgcaaacgaggtgaagaatgt
ccgtaccggcatgagaagcccactgaccctgatgaccctctggctgatcagaatatcaag
gaccgttactatggtgtcaatgatcctgttgctgacaagttactgaagagggctgcagcc
atgcccaggctggaacccccagaggacaagtccatcactacattgtatgtgggtaaccta
ggtgacaggattggtgagaaggagttgcgagaccatttctaccagtatggggagctacgc
agtgtaaatgtggtggctaagcagcagtatgcctttgtgcaatttaccacacgttctgct
gcagaacttgctgcagagcgcaccttcaacaaacttatcattcagggaaggcggctcaac
ataaaatggggccggtcgcaggccagacaaggtggtcttggcattgggggcattgaaggt
cttgagggagaggaggtggctccacaacctttggagccagttcctggcctgcccacacta
cctccacctccagaggaacttcagaacaacttcttcaatctaccctcacaggcagccagc
ataccactcccaccaggacaggcaccagctgtcgctggggcaccatcaatccgaccccct
atgcctccaggccaagctcctcccagacctcctgtccctcctccaggcagcctcccagga
ggccctcctcctgtgagtggtccccttggcccacgtccacccccaggggttccccctgct
cctccaggtcacctgccacccctccagccccctcctttcttccccccacaccttcgtgcc
ccacttcgccccccaccaggagttcgccctccaacatacttcccccagccacctcccatc
ccaggtgtaggaccccctcctcccctcacacatggcatcatccactacccctcgcaagat
cccacacaaatgggggccaatccagacaagaaatag
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