Penaeus monodon (black tiger shrimp): 119585234
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Entry
119585234 CDS
T08784
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pmoo03037
]
119585234
Cilium and associated proteins [BR:
pmoo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
119585234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_14
TPR_7
TPR_6
TPR_16
TPR_11
ANAPC3
TPR_9
TPR_17
TPR_10
ARM_TT21_5th
Fis1_TPR_C
ARM_TT21_4th
ARM_TT21_N
TPR_CcmH_CycH
HAT_PRP39_C
TPR_Slam
TPR_20
TPR-S
TPR_21
ARM_TT21_C
TPR_MalT
Foie-gras_1
Coatomer_E
Motif
Other DBs
NCBI-GeneID:
119585234
NCBI-ProteinID:
XP_037789822
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All DBs
Position
19:complement(40060973..40080329)
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AA seq
849 aa
AA seq
DB search
MDNLRFAGDDDEDLYSGFDSVHPALDTRQLDADQGFQEAVRTSYGRRPPTQSRAPTTAAR
LTSTAGLRIGTGQGTGLVLNSSVGQVGPGSSDGLKRPMTSMRGTGYTSQSNVFDPLNQAS
KGPAPALISKTDESPEEKIKSLERRVMGLIEESCMAASRGEIRLALDRAKEASSKERSLI
RQREQAGLSDGHNLDLTFSVLFNLANQYAANDMYTEALNTYQVITKDRMFNNSGRLRVNM
GNIHYKMGQYNKAIKFYRMALDQVPNTHKSMRIKIMHNIGLVFVKMAQYSEACTSFEYIM
QEEANFKTGLDLVTAYYALGDKEKMKKGFLRLLECQLDIDDDEKYTASSEDTQSNLILEV
IRNDPLRKMERQMKQEAERSILTAAKLISPVIENTFSEGYNWCVDAIKNSQYADLANDLE
INKAVMFLRQKNFKDAVETLKMFEKKETKVASTAATNLSFLYFLQNEIDLAEKYALMARD
SNGYNDSALVNLGNCCFKRKDYEKAREHYIAALDIDASCVEALYNLGLTNKKLGRYEEAL
DSLLKMHAIVRNYPPVVYQIASLYQELSDIDQASEWYLQLLGLVPTDPHIHQRLGQLFDT
EGDKQQGYQYYFDSYRYFPSNLEVIDWLGSYFIEHQVAEKAISYFERAALMQPDEVKWQL
MVAACHRRSGNYQQALQTYKQIHRRFPENIECLKLLIRLSSDLGLKETAEYAQELKKAER
AQEQRESRAASGSRPGSRRSSSRASRSGSAASGHEEPGALPPKSPGPGARASSRGSRSIP
GSAMSGRMTRLSLNDLDENEPFVPSNKEVDSSYVDPLGPLQERPKTSMRRKQDEDDFADE
ELGDDLLPE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggataacttacgttttgctggagatgatgatgaggacctttactcagggtttgattct
gttcatcctgctcttgatacacggcagctagatgctgatcagggttttcaagaagctgtt
cgcacaagttatggcagacggccaccgactcagagtcgagcccccacgacagctgctcgc
ctcacttctactgctgggcttcggatagggactggtcaaggtactgggttggtgctaaat
agctcagtgggccaagttggtccagggtcaagtgatggacttaaaaggccaatgaccagc
atgagaggaacaggttatacatcccagtcaaatgtgtttgatcccctcaatcaagcaagc
aaaggacctgctcctgctcttatttccaaaactgatgaaagcccagaagaaaagataaag
tcacttgaacgtcgagtaatggggcttattgaagagtcctgcatggctgcttctagagga
gaaattcgcctggcccttgacagagccaaagaggcttctagtaaagaaagatctctcata
aggcagcgggaacaggcaggattgtctgatggacacaacttggatctcaccttttctgtc
cttttcaatctggctaaccagtatgctgccaatgacatgtacacagaagccctaaataca
tatcaggttattacaaaagaccgcatgtttaacaattctggccggcttcgagtcaacatg
ggcaacatccactacaaaatgggacagtataacaaggccataaaattctatcgcatggct
ttagatcaggttcctaatacgcataaaagtatgaggataaaaataatgcacaatattggc
ctggtgtttgtcaagatggcacagtactctgaggcatgtaccagctttgaatacattatg
caggaggaggcaaactttaagactgggctggatttagttacagcatattatgctcttgga
gacaaggaaaaaatgaagaaaggcttccttcgtttgctagaatgccaattagatattgat
gacgatgaaaagtacacagcttcatcagaagatactcagtccaacctgattcttgaggtc
atccgcaatgatcctcttcgaaagatggaaaggcagatgaagcaagaggctgaacgttcg
atacttacagctgcaaagctcatttcacctgtcattgagaataccttcagtgaaggttac
aattggtgtgtagatgcaatcaagaattcccagtatgcagaccttgcaaatgatctggaa
atcaacaaagctgtcatgtttttgaggcaaaagaactttaaagatgctgtagagacactc
aaaatgtttgagaagaaagaaacaaaagtagccagcacagctgctacaaatctttccttc
ttgtatttcttgcaaaatgaaattgacttggctgaaaaatatgccctcatggcaagggat
tccaatggctacaatgattctgcccttgtgaatttagggaactgctgcttcaagaggaaa
gattatgagaaagctcgtgagcactacatagctgctttggacatagatgcatcatgtgtg
gaagctctatacaatcttggactaacaaacaagaaacttggacgttatgaagaggcactt
gactccttactgaaaatgcatgccattgttcgcaattatccaccagtagtctaccagatt
gccagtttgtatcaggagctgagtgacatcgaccaggcttctgagtggtatttacagttg
ctcggtctagttccaactgatcctcacatccatcagcgattgggccagctttttgacaca
gaaggtgacaagcaacaaggataccaatattactttgattcttacagatatttccctagc
aacctagaagtgattgattggttggggtcctacttcattgagcaccaggttgcagaaaag
gcaatcagttactttgaaagagctgcattgatgcagcctgatgaagtaaagtggcaattg
atggtggctgcatgtcacagacggtctggcaactaccaacaggcattgcagacctacaag
cagatccatcgaagattcccagaaaatatagagtgtctgaaattgctgattcgactcagt
agtgacctgggattaaaggaaacagctgagtatgcccaggagctgaagaaggctgaaaga
gctcaagagcagcgtgagagccgagctgccagtggctctcgtcctggatctcgaagatcc
tcttctcgggcttcacgtagtggctcagctgcctctggccacgaggaaccaggggcttta
cctcccaagagtccaggtccaggtgctagagcaagttcccgtggttctcgcagtatccca
ggctcagccatgagtggcagaatgacacgcctttcactgaatgatcttgatgagaatgag
ccatttgtgccatctaacaaagaagttgacagcagctatgtggatcccttaggtccattg
caagaacgcccaaagaccagcatgagaagaaaacaggatgaggatgactttgctgatgaa
gaattgggtgatgatttgttgccagagtaa
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