Penaeus monodon (black tiger shrimp): 119585577
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Entry
119585577 CDS
T08784
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03030
DNA replication
pmoo03410
Base excision repair
pmoo03420
Nucleotide excision repair
pmoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119585577
03410 Base excision repair
119585577
03420 Nucleotide excision repair
119585577
03430 Mismatch repair
119585577
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoo03032
]
119585577
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119585577
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119585577
DNA replication proteins [BR:
pmoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119585577
DNA Replication Termination Factors
ELG1-RFC complex
119585577
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119585577
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119585577
Check point factors
HRAD17(Rad24)-RFC complex
119585577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_lid_RFC1
AAA_22
AAA_16
Viral_helicase1
RCF1-5-like_lid
nSTAND_NTPase5
TniB
Rad17
Mg_chelatase
AAA_24
nSTAND3
AAA_assoc_2
AAA_11
RuvB_N
AAA_18
AAA_5
AAA_19
ABC_tran
RNA_helicase
NTPase_1
AAA_25
MipZ
AAA_28
AAA_23
MeaB
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
119585577
NCBI-ProteinID:
XP_037790174
LinkDB
All DBs
Position
20:complement(2226022..2237561)
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AA seq
346 aa
AA seq
DB search
MASSASAAMEADGGRDPACPAAAKASHVPWIEKYRPITFPEIVGNEETVARLEVFAKQGN
VPNIIIAGPPGVGKTTTILCLARAILGPSFKEGVMELNASNDRGIDVVRNKIKMFAQQKV
TLPKGKHKIIILDEADSMTDGAQQALRRTMELYSNTTRFALACNSSEKIIEPIQSRCAML
RYSKLTDSQVLAKVIEVCQREDLSHTEDGLEAIVFTAQGDMRQALNNLQSTAQGFNHVSA
ANVFKVCDEPHPLLIKDMIQHCVKTKFDDAYKVLNHLWKMGYAAEDIISNIFRVCKNTNM
AEYLKLEFIKEIGYTHLRIVQGNSSLLQLSGLLARLCSKSLQPAAA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcggcttcagcggcgatggaggcggacggcggccgcgaccccgcctgcccc
gcggccgccaaggcctcgcacgtgccctggattgaaaaatatcggccaattaccttccca
gagattgttggaaatgaggagactgtggcaaggctcgaagtgtttgccaagcagggaaat
gtacccaacatcattattgccggtcctccaggagttggcaaaaccaccactatcctgtgt
cttgcgagggcaattctcgggcctagcttcaaggagggggtaatggagctgaacgcctcg
aacgaccgtggcattgacgttgtgcgaaacaagatcaaaatgtttgcccaacaaaaagtg
actctacccaagggaaagcacaaaattattatccttgatgaggctgatagcatgacagat
ggcgcccaacaagcactccgaagaaccatggaactttattcaaatactacacgttttgca
ctagcttgtaattcctcggaaaaaatcattgaaccaatacagtctagatgtgctatgctg
agatactcgaagcttacagattcacaggttctggccaaagttattgaagtttgccagaga
gaagacctgagtcacacggaagatggtctggaagccattgttttcacagcacaaggagac
atgagacaggcccttaataatttgcagtctacagcccaaggattcaaccatgtgtctgct
gcaaatgtgtttaaggtgtgtgatgagcctcatcccctgttgatcaaggacatgatccaa
cattgtgtgaaaactaaatttgatgatgcttataaggttctgaatcatctgtggaaaatg
ggatatgctgcagaggatattattagtaatatatttcgtgtttgtaaaaatacaaacatg
gcagagtacctgaaactagagtttataaaggagattggctacactcacttacgtatcgtt
caggggaactcctctctcctccagttgtcaggactgctggccaggttgtgttccaagtcc
cttcagccggctgcagcataa
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