Penaeus monodon (black tiger shrimp): 119585580
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Entry
119585580 CDS
T08784
Name
(RefSeq) putative elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmoo03016
]
119585580
Transfer RNA biogenesis [BR:
pmoo03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
119585580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_NUP159_NUP214
TPR_GEMI5
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
119585580
NCBI-ProteinID:
XP_037790176
LinkDB
All DBs
Position
20:2425300..2433790
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AA seq
1355 aa
AA seq
DB search
MRNLRLSDHASEALHNNSEGLLCVHPITSTVYRVDKDGLEIIKGDSEEFPQLMWSNSDIQ
TSKIVQVDFVTAINALCIITNEGDVFTVNTENGEVEVVGSVSAGLDAACWSPDQELLVLV
TRDSSVVMMTAEFDPLVEFPLNHDGFGESEFINIGWGKKETQFHGQQGKAAAKSGKSAAV
PVSEWDDLKPRISWRGDGQMFAVSYVTSESKCRRIRVINNEGVLQYTSEETSGLEHSLSW
KPSGSLIASSQRLPNKHDIVFFEKNGLRHGEFSLPFKPSEVLVKEVMWNQDSTVLLVWLE
KLENNAVTSSIIQLWTTGNYHWYLKQELKYNEKICHICWDNEAPLILYLLTATQYYYYSW
TFHTDISQGQGVSDLAQVGVIDGTKLKMTPFRQAVVPPPMSAYVITFQDCIQAVMFAPSV
IRKCEASPDSSLCVEDSGFLEAFDPPGCNSNNLCVVHGSGILSFLTQAHASDENLDDQGC
GVQVTGAGGNGFTIKVKVHRVFAQHQIEWEIEPKPKESILLYNWLWVSKNTMIAFYKEEN
SFMAVIDLQSLGSEAGRTVVRTVLPLEDTVLSVASAPDGSMLVLQLTSGALVKADLGLQK
IEPFEVDGREVQFPTVCQKLAVAPVDEGTDVAVLGLTRRNRLYWGDKQLLPNCTSFHIHN
GHLLVTSSNHLLLTIPLMRKAFEKLLEGKIEDSWAVSARKVERGSQLVTAVPLDMRVVLQ
MPRGNLEVISPRPLAVHLIKRLLNEHNYHQAIDIMRKQRVDLNLLYDHNPEDFFKHTVHF
VQNIDNSHWLDLFIANLSEVDVTNTMYFFNYSEQQTKRPYPQSNKIDAVCTAIREAMMKV
NQEKFLLPILTSYVKMTKSQMDVALRTVQELKDTKDNKHVVSAEEGLKHLLYIADVNELF
DVALGTYDFDLVMMVAEKSQKDPKEYLPFLNELRKLEEDYMKFKINVHLRRFRKALECIG
HGRDHMEECMNLIVSENLYRDALQMFANNHDMHQAVCESYASYLMSRQHHNEAGMMYMRA
QRMEDAMNAYRLSGNWKMVLVMGAKLKLNKEKMTDLCYALVENLKDRRLYADAAWIYEDY
LKNEEEAVDLLVKASQWEDALRVAYRYGRPDLVDTNIKPGCIEQGETCLQELDRLRDTFT
HYCSRLEIAREVKEKQHLDILEGRGEANLDSDLYSDTSTVTGISYTQSHTVGSRSGSSVS
GKTFRSSKNRKKLERKKYSTKEGSAYEDLGLVVALHETITTADQMATSVTALATSLVTFG
IDHKAAELQTKFSALLDLIDKNKKKIWPPDVQADEEEPQFGPHLTTDGAVNLFERNDPRH
IPFATQRVKELEPCHRHPPPVTRPKNWALHMLKQK
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctaagattaagtgaccacgcctctgaagctttgcataataattctgaggga
ttattatgcgtccatccaatcacttcgacggtctaccgcgtcgacaaagacggcctagaa
atcataaaaggggatagtgaagagttccctcagttgatgtggagtaactccgatatacag
acatccaagattgttcaagtagattttgtgactgcaatcaatgctttgtgcattataacc
aacgaaggggatgtctttacagtaaatactgagaatggagaggttgaagttgtcggatct
gtttccgcgggcttagatgctgcctgctggagccccgaccaggaactccttgtcctggtc
actcgggattccagtgttgttatgatgacagcagagttcgatcctcttgttgaatttcca
ctcaatcatgatggttttggtgagagtgagttcattaacattgggtgggggaagaaggag
acgcagttccacggccagcagggcaaagctgcggcaaagagcgggaagagcgcagctgtg
cctgtgtcagaatgggacgaccttaagcctcggatcagttggcgcggagacggccaaatg
tttgcagtcagttatgtcactagtgaaagcaagtgccgcaggataagagtgataaacaat
gaaggtgttttgcaatatacaagtgaagagacttctggccttgagcactcactgtcctgg
aagccatcaggtagcttaattgcctcatcgcagaggctcccaaacaaacacgatattgtg
ttttttgagaaaaatggtctccgacatggggaattttctctgccattcaagccttcggaa
gtgctcgtgaaggaagtcatgtggaaccaagattccactgtgttgttagtctggctagag
aagcttgaaaacaatgcagtaacatccagcattatccagctttggacaacaggaaattac
cactggtatctgaaacaagagctcaaatataatgagaagatttgtcacatttgttgggat
aatgaggctcctctcattctatacctcctaactgctactcagtattattactacagctgg
acttttcacactgacatatctcaaggacaaggtgtctcagatctggcccaggttggagtg
attgatggaaccaaattgaaaatgaccccattcaggcaggctgtggtaccgccaccgatg
tccgcatatgtgatcactttccaggactgcatccaagctgtgatgtttgccccatcagtt
atcaggaaatgtgaggcatcgccagacagctccctgtgtgtcgaggattcgggtttcctt
gaggcttttgaccctccaggttgtaacagtaacaacctgtgtgttgttcatgggtcaggc
atcctctcttttctgacgcaggctcatgccagcgatgaaaacttagacgatcaaggttgt
ggggttcaagttaccggagcaggagggaacgggtttactatcaaagtaaaagttcacaga
gtatttgctcaacatcagatagaatgggaaattgagccaaaacccaaagagtccattttg
ctttataattggctatgggtatccaaaaatacaatgatagcattttataaagaagagaat
agttttatggctgtcattgatttacagtcactagggtctgaagcaggcagaacagttgtg
aggactgttttacctctcgaggacacagtcctaagtgttgcttctgctccagatggatcc
atgttggtcttacagttaacttctggagctcttgtaaaagctgatctggggttacagaaa
atagaaccatttgaagtagatggacgtgaagtgcagtttccaactgtgtgtcagaaatta
gcagtagccccagttgacgaaggaacagatgttgctgttttaggtttgacgcgtagaaat
cgtctctattggggagacaagcaacttcttcctaattgtacttctttccatattcataat
ggtcatttgcttgtaacttcttcaaatcacttacttctcacaattcctttgatgcgaaaa
gcttttgaaaaactactggaggggaagattgaggattcgtgggcagtgagcgcacgtaag
gtggaaagaggctcccagttagtgacagcagtgcccctggatatgagagttgtccttcag
atgccacgtggcaacctggaagttataagtccaaggcctctagcagtccatctgataaaa
cgcctcttaaatgaacacaattaccaccaggcaattgacatcatgcggaaacaacgtgtt
gatctgaatcttttatatgatcacaacccggaggatttcttcaagcacactgttcacttt
gtgcaaaatattgacaattctcactggctggatttgttcatagcaaacttaagtgaagtt
gacgtgacaaacacaatgtacttctttaattatagtgagcaacagaccaagaggccatac
cctcagagcaacaagattgatgcagtatgcacagcaataagggaagcaatgatgaaagta
aaccaggaaaagttccttctgccaattctaacttcatatgtaaaaatgaccaagagtcag
atggacgttgctctgaggacggtccaagaactcaaggacacaaaggataacaagcatgta
gtttctgctgaagaaggactcaaacatttactgtacatagctgatgtgaatgagctattt
gatgttgcgcttggtacctatgactttgatttagttatgatggtggcagaaaaatcacag
aaagaccccaaggaatatctaccatttttaaatgaacttaggaaattagaagaagattat
atgaagttcaagataaacgtacatctccgaaggttcagaaaagctcttgagtgtataggt
catggcagagatcacatggaagaatgtatgaacctcattgtatctgaaaatctgtatagg
gatgctttgcagatgtttgcaaataaccatgatatgcaccaagcagtatgtgaaagttat
gcgagctatctgatgtcaagacagcatcataatgaagcaggtatgatgtatatgcgtgca
cagaggatggaagatgccatgaatgcttataggttgtcaggaaactggaagatggtattg
gttatgggagcaaagttaaagctcaacaaggagaaaatgactgatttatgttacgcatta
gtcgagaacctgaaagatagaagactctatgctgatgctgcctggatttatgaggattat
ttgaaaaatgaggaggaagctgtcgatctcctggtgaaggcaagtcagtgggaagatgcg
ctaagagtagcctatagatatggacgcccagatcttgttgacaccaatatcaaacctgga
tgcatagaacagggggaaacttgtttgcaagaacttgatagacttagagacaccttcact
cactactgctctcgtcttgagattgcgagagaagtgaaagaaaagcagcaccttgatatc
ttagaaggaaggggagaagcaaaccttgatagtgacctatactcagatacaagcacagta
acaggcatctcatacactcaaagccacacagttggatctcgcagtggttcgtccgtgtca
gggaagacctttcgttctagtaagaacagaaagaaactggagcgcaagaaatatagcact
aaagagggcagtgcctacgaagaccttgggctcgttgttgctttgcacgaaaccataacc
acagcagaccagatggctacctcagtaaccgctctggcgacaagtctcgttacatttggc
attgatcataaggccgcagagttgcaaaccaagttctctgctttgctggatctcattgac
aaaaacaagaaaaagatttggcctccagatgtgcaggctgatgaagaagaaccacagttt
ggccctcaccttaccactgatggggcagtcaacttgtttgagaggaatgatccaaggcac
attccgtttgcaacacagagagtgaaagagcttgagccgtgtcatcgccatcccccaccc
gtaacgaggcctaagaattgggctttgcatatgttgaagcagaagtga
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