Penaeus monodon (black tiger shrimp): 119585661
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Entry
119585661 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1-B-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
pmoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119585661
03015 mRNA surveillance pathway
119585661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119585661
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119585661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_3
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
119585661
NCBI-ProteinID:
XP_037790265
LinkDB
All DBs
Position
20:complement(17400646..17408931)
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AA seq
330 aa
AA seq
DB search
MDSCNNFVAHLTDVVAFINKTAIGIAGSTMVRSRSRSASSSGSEKERKAREKEKKPRRQS
SSSDSSSSRSSSRSSSGSSGSSDSSSSSSSSSRSSSSSSSSSTSRSRSRDKENKLKDKEK
DKKDDPRSTVKAGAEKSRSRSRDKKTKPKKPSKSRSRSGSPRGRRKPRSPTPRPTRIHVG
RLTRNVTKEHLVEIFSVYGAVKSVDMSMYDMRVNNTLNRYGYIDFEKPEDAENAMKHMDG
GQVDGQEITAAPVLIPRQIPPRRRSPPPMMQRRGPPRWRSPLRYIPGRMRRRSPPPMRRR
SPPRRRSPRSRSRTPPRRRRYSRSSSSSSR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggattcttgtaataatttcgtggctcatttgacggacgtagtggcgtttataaacaaa
accgccattggcatagcaggatcgacgatggttcgtagtcgaagtcgatcggcatcctcc
agcggctcggagaaggagcggaaagccagagaaaaggagaagaagccgaggagacagtct
tccagcagtgacagtagctccagcagaagttcttcaagaagctcttcaggttcctcgggc
agttctgacagttcctctagcagtagctcttcatcaaggtcatcttcatcgtcatcgtcg
tcttctacttcccgatcaagatctagagataaggaaaacaaattaaaggataaggagaag
gacaaaaaagatgatccaaggtccacagtcaaagctggggcagagaagagccgcagtcgt
agccgagacaagaaaaccaagccaaagaaaccgtcaaagtctcgttctcgatcaggctct
ccacgaggccgcagaaaaccccgctcccccaccccaagaccaaccaggatccatgtgggc
cgactgacgaggaatgtgaccaaggaacacctcgtggagatcttctctgtttacggtgca
gtgaaaagtgttgatatgtcaatgtacgatatgcgcgtaaacaacacccttaaccgttat
ggctacatagactttgagaagccagaggatgcagagaatgccatgaagcacatggatgga
gggcaggtggatggccaagagatcacagcagccccagtgctcattccacggcagatcccc
ccacgacgtcgctcacccccacccatgatgcaacgcagaggaccaccccgctggcgttct
cccctcagatatatcccagggagaatgcgtcgccgttccccaccccccatgaggcgtcgc
tcaccacctcgtcgcagatcccctcgctcgcggtctcgcactcctcccaggcgcagaaga
tattcacgctcatcatcatcatcctctcgctga
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