Penaeus monodon (black tiger shrimp): 119585733
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Entry
119585733 CDS
T08784
Name
(RefSeq) ATP-dependent RNA helicase HAS1-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119585733
03009 Ribosome biogenesis [BR:
pmoo03009
]
119585733
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119585733
Spliceosome [BR:
pmoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119585733
Ribosome biogenesis [BR:
pmoo03009
]
Eukaryotic type
90S particles
Helicases
119585733
Pre-60S particles
119585733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
DUF7514
AAA_22
Motif
Other DBs
NCBI-GeneID:
119585733
NCBI-ProteinID:
XP_037790353
LinkDB
All DBs
Position
20:24982719..24992094
Genome browser
AA seq
460 aa
AA seq
DB search
MAGTSILTNRTLEWVQEKGLCSEPTLAALTAQGYKQLTAIQLLAIPELLAKKDTFLHART
GSGKTLGFLLPTLERLRAMGFKKSHGVGALVISPTRELALQIAQVLKPLAEAHDFNSLTL
IGGKKLKEEEKKDGCMLMVGTPGRLTEILTAPEPDFRIAKLKILILDEADKLFDDSMHTE
YLRMICKCLPLEKMQKVLVSATVNQKCLKLAKQILKTEFSYLTSEKKVSPTTKQIKQSYL
LVSTTERVPMLVTVLRTLKKKKAIVFFNSCHSVKFHHEVLKHFGLPVLYCVGQEKQSQRS
NMYTKFVEMERGILLTTGMAERGWDIPGVQWIVQYDPPHKPEDYIHRIGRTGRGEGQTGQ
ALLFLRPEEEKFIAVLKGMNVEIDQLEFQGEFNDIQQQLFSLVSDDRDIRQIAKTAYKKF
LRAYQCHKLRKIFNVQTLDLNQVCQAFGFTKPPLELGKLT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggctggtacgagcatcctcacaaaccgcacactggaatgggtgcaagagaagggactt
tgttctgagcccactctggctgccttgactgctcagggatacaagcaactcactgcaatc
cagcttttagccattcctgaactactagccaagaaggatacattccttcatgctcgcaca
gggtcaggaaaaaccctgggctttttgttgccaacactggagaggttgagggcaatgggg
tttaagaaatctcatggtgttggagctttagtcatatcacccacaagagaactggctctt
cagatagcacaggtgttgaagccacttgcagaggcacatgattttaactccttaacctta
attggtggcaaaaagttaaaagaggaggaaaagaaagatggctgtatgctgatggtggga
acaccagggaggctaacagagatcttgacagcccctgagccagatttccgcattgcaaaa
ctgaagatcctgattctagatgaggctgacaaactcttcgatgacagcatgcatactgag
tacctgaggatgatatgcaaatgtttacctctagaaaaaatgcagaaagtcttagtaagt
gccacagttaaccaaaaatgcttgaagctcgccaagcaaattctcaaaacagaattttct
taccttacatcagagaagaaagtatcacccacaaccaagcaaataaagcaaagttatctt
ttagtgagcacaacagagagggttccaatgttagtaacagttttgcgcactctgaagaaa
aagaaggccatagtgttctttaattcttgccattccgtgaagtttcaccatgaagttctg
aagcattttgggctgcccgtcctgtattgtgttggccaagagaagcagagccagaggagt
aatatgtataccaaatttgtggaaatggagagaggaatccttttgacaaccggcatggca
gaacgagggtgggacatcccaggcgttcagtggattgtgcagtatgatcccccccataaa
cctgaagactacattcaccgaattggtcgcactggccgtggtgaaggacagacaggacag
gcgctcttattcctgcgaccagaagaagaaaaatttattgctgttttaaagggaatgaat
gttgagattgatcagctagaattccagggagagtttaatgatatacaacagcagctgttc
tcactggtttctgatgatagagacatccgccagatagcaaaaacagcatacaagaaattt
ttacgagcctaccagtgccacaagctcagaaaaatatttaatgttcaaaccctggatctg
aaccaagtctgtcaagcttttggcttcacaaaaccacctttggaacttggcaagctgacg
tga
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