Penaeus monodon (black tiger shrimp): 119586112
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Entry
119586112 CDS
T08784
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmoo03009
]
119586112
Ribosome biogenesis [BR:
pmoo03009
]
Eukaryotic type
90S particles
Other 90S particles
119586112
Pre-60S particles
Other pre-60S particles
119586112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
DUF3384
Tra1_ring
Histone_HNS_N
MMS19_C
Motif
Other DBs
NCBI-GeneID:
119586112
NCBI-ProteinID:
XP_037790731
LinkDB
All DBs
Position
21:complement(3493998..3506124)
Genome browser
AA seq
1332 aa
AA seq
DB search
MKFKRTSGKGKRWKKGDSCVSNPENTKFREAARGRFFQKVEGESSLTKEAVAQHEAALSN
VSDQMENLGITPEDLQSAGKSCKTFATNFTTCTIPAFEKFFRDFSVSSEQHTRMLAIHAA
AQEYMKESGMPETSTSYFCALMISLEGISDSEGDVSATLALMAKVIRRVQVEVLRAKFGD
FAKRLDYIITQYQESGNGSLLVNALGSMSVLLRAQMRDQWSYPYTNNLLQKILAFTVYDK
PKVRKAAHHDVTAVLKASCFMLDEGDEKVNHPAAGEVAEFCNAQLRASSEMGNTKTTLHL
LVLLRQVIASFPRKQLKVACEGILSVMQLGNSLINASAMQALYSVMVSKPSPEVFPTGTN
AALITALTTGTSGVPGSLAAVIPSMNDSQPACAWITVLTAALLNLFRTDEEEGMKYITTW
FVQLVPFWCSEHNDVHSKVFESFEALLEESIGKCSEEMQATENFQLQVQTLFQAVEGGMS
LQYQPAWVYVFKTLSKCFSTIGPLFPEMMMPCLKNLVTLVRDWNCPVRPHVEHCIGAAVK
GLGPKALMSVVPLQITGNIAEDEKHLWVLPLLRRHVRNTELTFFEDYFVHLAGKCFVILN
ALKEKGEGKSLLSKTYRTVENQIWGLLPSFCEKAKDVEKALSNEKFARILCDHIKFRDDT
RIQVMAAMRNLINDNKENPGRLAIYSKNYLPALFNVYLTRVKDKFYRETKEPTIHQSQRL
AAYSTIKTYLQIVPKPKCNEFLNLIMNKYDAETDSFKKQAFLDLVRAFLPYMEIDSYEKF
FDRVKPLLTENVNHKEQKAAYRLLEELLSVGTESSSQFITSNLKMLYEILLQSLTAASPP
SRAPRLRCIRQVLLNLKIDMEEEERDTFLQQVVAETVMCCGKGMSSATRKAAFMLLTDVG
TTIQKQLQCSPEDTVRHSMKLFLAGLVGSPALAKNSIVAITSLTYQFKSIIPKDVLDLLM
NNMCIQLLCKSREIVGACLSFFLATLSFLPVPVMSEYFENIFKTLCKIDPDTQRKFRRRM
RDILSRLVRKFGSDRLMAMVPPGDGILQKRIRNLRKEEARKKREREARRKQGRKAEDSDD
DFVRGAIPPSLDEILAEIDSDDDRSADDDDENKGGRKGKREDKKKGLKEAWIKEDEDNIV
DLLDPSAGQAVLSKRPKLKARRPKEGSTGGFEVDENTGRIIIVDPEEQKGKEKEKMGSSN
IEFMEDLDEFLEMKAGVKEGKIKQRKRNLSEGSEENEEPPNKVSGKGPSNVDSKKIAQKK
RFDYGSEFRMRKAKGDMMKKGKVMPYAYVQFTKDRLNKRKKAKFQGQFTSLVRGAKKGVA
KGSKQKMRSKKQ
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaagaggacgagcgggaagggcaagaggtggaagaaaggagacagctgcgtg
tccaatcccgagaacacgaaatttagagaggcggcgaggggcagattttttcagaaggtt
gaaggtgagagcagtttgaccaaggaggccgtcgcacagcatgaagcagcgctcagcaat
gtctcagatcagatggagaatcttggcatcactccagaggaccttcagagtgcgggaaag
tcctgtaaaacttttgcaactaacttcaccacatgcacaatcccagctttcgaaaaattt
tttcgtgacttcagtgtgtcctcagagcaacatacccgcatgttggctatccatgcagct
gctcaagagtatatgaaggagtcaggcatgccagaaacgtcaacatcttatttttgtgct
ctgatgatcagtctggagggcattagcgacagtgagggggacgtcagtgcgacccttgcc
ctcatggccaaggtgatccgtcgcgtccaagtggaagtattacgcgccaagttcggtgac
ttcgctaagagattggattatattattacgcagtatcaggagtctggcaatggtagcctg
cttgttaatgctcttgggtccatgtcggttctcctccgagcccagatgcgagaccagtgg
tcgtacccctataccaacaacctgctacagaaaatactggcgttcacagtctatgataag
ccaaaggtcagaaaagcagcccaccatgatgtcacagctgtcctgaaggcctcttgcttc
atgctggatgaaggggatgagaaggtaaatcaccctgcagcaggagaggtggccgagttc
tgcaacgcgcagctgagggcttccagtgagatgggcaacaccaagacaacgctccacctc
ctggtcttgctccgacaagtcattgcgtcttttccgcggaaacagttgaaggtcgcatgt
gagggcatcctttcggtgatgcagctggggaactcccttataaatgccagtgccatgcag
gccctctacagtgtgatggtatccaagccaagtcctgaggttttcccaacagggaccaat
gcagccctgatcacggccctcaccacaggcaccagtggcgtaccaggcagtttggcagca
gttataccaagcatgaatgattctcagcctgcctgtgcttggatcacggttcttacggct
gcgcttttgaatctctttaggactgatgaagaagagggaatgaagtacataactacatgg
tttgttcagcttgttccattctggtgcagtgagcacaatgatgttcattcaaaggtgttt
gaatcatttgaagcgctgctggaggaaagcataggaaaatgtagtgaagaaatgcaggca
actgaaaatttccaacttcaagtgcaaacccttttccaagctgtcgagggaggcatgtcg
ttgcagtaccagccagcttgggtttatgtctttaaaaccctgtcaaaatgtttcagcact
attggccctcttttcccggagatgatgatgccctgcttgaaaaacttggttacattggtc
agggactggaactgtccagtcagaccgcatgttgagcattgcattggcgctgctgttaaa
ggcctaggacccaaggccctgatgtctgttgtgccactgcagatcacaggcaacattgct
gaggatgaaaagcacctctgggttctccctctcttgaggagacatgtcagaaatacagag
ttgactttctttgaggactattttgtgcacttggctgggaagtgtttcgtcatcctaaat
gcgctgaaagagaaaggtgaagggaaatctctcctgagcaaaacttaccggacagtagaa
aaccagatatggggcctgctgcctagtttctgtgagaaggccaaagatgttgaaaaggct
ttaagcaatgagaagtttgcccgtatcctgtgtgatcacattaagttccgtgatgacaca
aggattcaggtcatggcagcaatgcgaaacctgattaatgataacaaggaaaatcccggc
aggttagccatatattcaaagaattacttgccagcactgtttaatgtatacttgacaaga
gttaaggacaaattttacagagagacgaaagaacccacgattcatcaaagccaaagattg
gctgcatattcaactattaaaacatacctacaaattgtacccaaacccaagtgtaatgaa
tttctaaatctaattatgaataaatatgatgcagagacagatagcttcaagaagcaggca
ttccttgatctggttagagcgttccttccttacatggagattgattcatatgaaaaattc
tttgatagagtaaagccacttctcacagagaacgtgaaccacaaggaacagaaagcagca
tacagactcttagaggaactcctcagtgttggaacagagagcagctcacagttcatcaca
agtaacttgaagatgctctatgaaatcctcctgcagtctctcacagctgcctccccaccc
tcgcgagccccaagactgaggtgcatcaggcaggttctgttgaatctaaagatagatatg
gaggaggaggagagagatactttcctacagcaggttgttgccgagactgtcatgtgctgt
ggcaaagggatgtcgtcagccacacggaaagcagctttcatgctcctgactgatgtggga
accaccatccagaagcaacttcaatgctccccggaagacacggtgcggcacagcatgaag
ctcttcctggctggcttggttggctctcctgctctggcaaagaattccatagttgccatc
acatccctcacatatcagtttaagagtatcatcccaaaggatgtgctagatcttcttatg
aacaacatgtgtatccaactcctatgcaagtcaagagagattgtgggagcttgcttgtcc
ttcttcttggccactctctcattcctgccagtcccagttatgtctgaatattttgagaac
atcttcaagaccctctgcaaaatagaccctgacacccagcgcaaattccgcagaagaatg
cgtgacattctaagcagacttgtgaggaagtttggcagcgatcgcctcatggcaatggta
ccaccgggagacggcatcttacagaagcgaatacgcaatctccgtaaggaagaagcaagg
aaaaagagagagagagaagctaggaggaagcagggacgcaaagcagaggatagcgatgat
gattttgttagaggagctattccaccaagtttggatgagattcttgcggagattgactcg
gatgacgacaggagtgctgatgatgatgatgagaataaaggtggaaggaaagggaagaga
gaagataagaagaaggggctaaaggaagcctggattaaggaggatgaggacaacattgtg
gatctccttgacccatcggccggccaagcagtgctttccaagagacccaagttgaaggcc
aggcgtcctaaagagggtagtacgggtggatttgaggtggacgagaatacaggccgcatc
atcatcgttgatccagaggagcagaaggggaaggaaaaggagaagatggggtcttctaat
atagaattcatggaggatcttgacgagttcttggaaatgaaggcaggtgtcaaagaaggc
aagattaaacagcgcaagagaaatttgagtgagggttcagaagagaatgaagaacccccc
aataaggtatccggaaagggcccaagcaatgtagacagcaagaaaatagcacagaagaaa
cgctttgactacggctcagaattccgtatgaggaaggcaaagggggatatgatgaagaag
gggaaggtcatgccatatgcttatgtgcagttcaccaaagacagactcaataagaggaaa
aaggccaaattccaaggtcagttcaccagtttggtccgaggtgcaaagaagggagtggca
aagggttcaaaacagaagatgaggagcaagaagcagtaa
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