Penaeus monodon (black tiger shrimp): 119586331
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Entry
119586331 CDS
T08784
Name
(RefSeq) high mobility group protein DSP1-like
KO
K10802
high mobility group protein B1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03410
Base excision repair
pmoo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119586331
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119586331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119586331
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119586331
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoo04147
]
119586331
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
119586331
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119586331
MMR (mismatch excision repair)
Other MMR factors
119586331
Exosome [BR:
pmoo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119586331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_box_5
HMG_WDHD1
YABBY
DUF3974
Motif
Other DBs
NCBI-GeneID:
119586331
NCBI-ProteinID:
XP_037790973
LinkDB
All DBs
Position
21:20828918..20829967
Genome browser
AA seq
224 aa
AA seq
DB search
MPRGRPRGVAAEKPRGRMTAYAFFVQTCRTEHKKLHPDENVQFAEFSRQCSERWKTMSDK
EKKKFHDMAEDDKKRYDEEMKDFVPSPGAGRRGRRARGRRPKDPNKPKRALSAFFYYAND
ERPKVRAANPDFSVGEVAKELGRQWNELGEDEKVKYEKLAEEDRARYDREMTAYKFGGAS
PQKKMKASNGHPVDADPDDDEDDGEVGGEDEDEDDVSDEGSEDE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtggaagacccagaggagttgcagccgagaagcctcgtggccgcatgacggcc
tatgcgtttttcgtgcagacttgccgtacagaacacaagaaacttcatcccgacgagaat
gtgcagttcgccgaattctcgcgccagtgttccgagcggtggaagacgatgtccgacaag
gaaaagaagaagttccacgacatggcagaggacgacaagaagaggtacgacgaggagatg
aaggacttcgtaccctcgccgggcgcggggcggcgagggcggcgcgcgcggggaaggagg
cccaaggaccccaataagcccaagcgcgccctgtccgccttcttctattatgccaacgac
gagaggcctaaggtgcgagcggccaaccccgacttctccgtgggcgaggtcgcgaaggag
ctcggccgtcagtggaacgagctaggcgaggacgagaaggtcaagtacgagaagctggcg
gaggaggaccgcgcccgctacgaccgcgagatgacggcgtacaagttcggcggcgcgtcc
cctcagaagaagatgaaggcgagcaacggacaccctgtggacgcggaccctgatgacgac
gaagacgacggcgaagtgggcggcgaggacgaggacgaggacgacgtgtctgacgaaggg
tcagaggacgagtga
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