Penaeus monodon (black tiger shrimp): 119586467
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Entry
119586467 CDS
T08784
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03430
Mismatch repair
pmoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119586467
03460 Fanconi anemia pathway
119586467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119586467
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119586467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
119586467
NCBI-ProteinID:
XP_037791129
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All DBs
Position
21:complement(38365051..38373267)
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AA seq
998 aa
AA seq
DB search
MDELEGIDLIENNGEAIPTTQAAKSIKAIDRTTVHKICSGQVVLTLGTAVKELVENSIDA
GATSVEIRLRDHGISMVEVIDNGKGVEENDFEGLTLKHHTSKIQDFGDLVGVKTFGFRGE
ALSSLCALSDLTIATRHESQAVATKLVYDHNGKLVSKTPCPRQVGTTVTLQNLFSTLPVR
HKEFQRNIKKEFGKMVQVLNSYCLISTGIRISCTNQSDKGKKAVVLSTNGHPTIKENISS
VFGAKQVSSLMEFKQETASDDILSEYGMQCSSEDIKGNTLFTLEGFISSCEHGQGRSASD
RQFYFINSRPCDPAKVSKVVNEVYHQYNRYQYPCVVLNIRLKEDDVDINVTPDKRQILVN
NEKLLLATIKTSMIRLYGNIPNSFKMQNTSLSNSFTSSPSNISSRASPSAGSPSNSRISA
LSQKFGRKSEGSPLSNFSPSQPSTPLSAFSLKRSFSNSSCADESPSNKQPKLESFLAKCK
SDPGKNPVTSMKSEVEDNAFLSDFTSLEKDEIVTNGDENKTESNDLVEEKCKDMEDGRMM
VKSEILESDEKEIMPPDDVDGTKEISIKTEDNQKETLLVLPSELVNGDAGISDGNEEIPN
TQESSDFANNNNEKDSSKTDEVRIPRLSSSSSKSPGLKSGLSQFSRSASVTSQSCKKAHS
ATDNFLNSLLAKKSQNKYVKEPNITSTNGYRQNAVDVREPEGEEAFEDTDFAEALEDEFY
EDNAPGEEKTKEEIIVCEEYDPNDFIANRKSRTIEFNIEDIRKKLNISSSPEKEEHGELV
RKFRAKIAPGENTSAEDELRKEISKDMFAKMEILGQFNLGFIIARFGSDLFIIDQHATDE
KYNFETLQATCTIQNQRLIAPQQLELTAANETVLLDNLEIFLKNGFEFKIDEEKPMGQRV
SLISMPHSRGWEFGRDDIDELIFMLSDAPGVMCRPTRVRAMFASRACRKSIMIGTALTKA
QMQKLVCHMGEIDQPWNCPHGRPTMRHLINLDMVTASR
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggacgaattggaaggaatcgacttaattgaaaataatggagaagcaattccaactaca
caggcagcaaagtctattaaagcgatagacagaacaacagttcataagatatgctctggc
caggttgttttaacactgggaacagctgtcaaagaacttgtggaaaacagtatagatgcc
ggagctacaagcgtagagatccgccttcgagatcatggcatttccatggttgaagttata
gataatggaaagggagtggaagagaatgactttgaagggttgactttaaaacatcatacc
tcaaaaatacaagactttggggacttggttggagtgaaaacctttgggttccgaggtgaa
gccctgagttccctgtgtgccctaagtgacctcacaattgcaacgcggcatgaaagtcaa
gcagttgccactaaacttgtttatgatcataatggcaaactcgtctccaaaactccttgc
cctagacaggttggaacaactgtcactctgcagaacctgttctcaaccttgccagtgaga
cacaaggaattccagcgtaatatcaagaaggagtttggcaagatggtgcaggtcctgaat
tcatactgcctaatatctactggaattaggatatcttgtacaaatcagagtgataagggc
aagaaagcagttgtgctgtcaacaaatggacatccaacaattaaggagaatatctcatca
gtatttggagccaaacaggtttcaagccttatggaattcaagcaggaaacagcatcagat
gatattttgtctgaatatgggatgcagtgctctagtgaagatatcaaaggaaatacatta
tttaccctggagggattcatttcgtcttgtgaacatggacagggacgttcagcctctgat
cgccagttctatttcatcaactctcgtccatgtgatccagcaaaagtcagcaaggtagtg
aatgaggtatatcatcagtataaccgctaccagtatccttgtgttgtgctcaacattcgt
ttgaaagaggatgacgttgacatcaatgtgactccagacaagaggcagatattagtcaat
aatgagaagcttttacttgcaacaatcaagacctcaatgattcgtctctatggaaatata
ccaaattctttcaaaatgcagaacacctctctcagcaactcttttacatcctcaccaagt
aatatctcatcaagagcaagccccagtgcagggagtccttccaatagtaggatctcagca
cttagccagaagtttggtcgtaaatctgaaggatctccactgtcaaacttctccccttca
cagccttcaactccactttcagcatttagcctcaagaggagcttttccaacagttcttgt
gctgatgaaagcccaagtaataaacaaccaaaacttgaatctttcctggcaaaatgcaaa
tctgatcctggaaaaaatcctgttacaagcatgaaatctgaggtagaagacaatgccttt
ctctcagatttcacttcactggaaaaagatgagattgttacaaatggagatgagaacaaa
acagaaagtaatgatttagttgaagaaaagtgtaaagacatggaagatggaagaatgatg
gtaaaaagtgaaattcttgaatctgatgagaaagaaatcatgccaccagacgatgtggat
gggacaaaggaaatttcaataaaaactgaagataaccaaaaggagacattattggtactg
ccatccgagcttgtaaatggagatgctggtatatcagatggcaatgaggagatacccaac
acccaggaaagcagcgactttgcaaataataacaatgaaaaagattcatcaaaaactgat
gaagtaagaattcctcggttatccagtagttcttcaaaaagtcctgggttaaagagtggt
ctttctcaattttctaggtctgcatcagtaacatctcaaagctgtaagaaggctcatagt
gctacagataatttcttaaatagtcttttagcaaagaaatcacagaacaaatatgtaaaa
gaacccaacataacatctaccaatggatacagacaaaatgctgtggatgtgagagagccg
gaaggtgaagaagcattcgaggacacagattttgcggaggccttggaagatgagttttat
gaagataatgctccaggagaggagaaaacaaaagaagagattattgtgtgtgaagagtat
gatccaaatgattttatagcaaacagaaaatctagaacaattgaattcaacattgaagac
atcagaaagaaattgaacataagtagtagtcctgaaaaagaagaacatggagaattagtc
agaaagttccgagccaagattgcccccggtgaaaatacgtcagcggaagatgagctgagg
aaagagatctcaaaagacatgtttgcaaagatggagattttgggtcagttcaatttggga
ttcatcatcgcccgctttggctcagaccttttcataattgaccagcatgcaactgatgaa
aagtacaactttgaaactctccaggcaacatgcacaattcagaatcagaggcttattgcc
ccacaacagctggaactgacagcagccaatgaaacagtcttgttagataacttggagata
tttttaaaaaatggatttgagtttaagattgatgaagagaaaccaatgggacaaagggta
agcctaatttcaatgccccatagccgtggttgggagtttggacgagatgacatcgatgaa
ttgatattcatgttatctgatgctcctggggtgatgtgtcgaccaactcgtgtaagggca
atgtttgcttcaagagcttgccgcaagtccattatgattggtactgcattaacaaaagca
cagatgcagaagctggtttgccatatgggtgagattgatcagccttggaattgtccgcat
ggtaggcccacaatgaggcatttgataaatcttgatatggtcactgcatccagatga
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