Penaeus monodon (black tiger shrimp): 119586549
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Entry
119586549 CDS
T08784
Name
(RefSeq) PMS1 protein homolog 1-like
KO
K10864
DNA mismatch repair protein PMS1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119586549
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119586549
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HMG_box_2
HMG_WDHD1
DUF6777
Motif
Other DBs
NCBI-GeneID:
119586549
NCBI-ProteinID:
XP_037791239
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All DBs
Position
3:complement(46339039..46348880)
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AA seq
997 aa
AA seq
DB search
MASGTSIVVSNLFKNVPVRRQYYNNPKRRKEELKKVEDLMLSFCIAAPEVHLTLVHEKNT
MIQKNSAKGIHHSLMNIFPTVYKKLKAESKEVEGIKLEVYLPDRGFCADQTTSRSCADRL
FVIVNRRPVSHKSIEKMVKAHFSQASEGCHGRYPIGVISLVLSPDELDVNLEPNKNKVLL
NDEETALESLKEILENLYGPLEMTKKSSHKKNGSESVTADTDITCTLACVTQKQGSNSNS
RDELDILDEFLAESLKEEEKQEKQQLKAPNGCKLEERLSKDYCIYNDKENDNFFENCNLT
PSNVDNRITRPMQVKDSPNPNGQPATRDEQYSHTPLRDKVLRLAKPGDESRIETVGRSYL
TSTQESRSHVLEDRRLPSLSLSTIHSEGSTPKRPNAGDENLSFICPSENTFSLSSNLLSK
KSSHTEGRQEVSSEDFDKCMEIASHKGESKRTQQSPSKDLSSQLHKTIMGDDGIPVFQIK
PLEVNDTSEGSSDDHVQPLQSANKLNLSSQEVQQELSKGSESAVTSRTEVQEKQISETTE
KEKSDLAGSWSRGHVTMGGNIQTVQIVTPKIQEDHVQKTPVTTNALKRLQPPSPGKQLSP
VPSKKMKHESLSPTSYEYVHGKSVKRPASAFILYSRDIRRTVLRENPGKDFAFIAKTMAD
RWKVADAKTKEYYKGLSNEESRRYQEEIRKIRENRSHNDSIFEKSNISRATLDKFMGPLT
PVAIKDDGKRHRKVPENVKCPWRNKTKNMEIDIGKIKQQLKKRSSQANKPGPFELIGSLA
NCGGWLCQEGGTITALNTSRLQEVVLSCTLLNTFNLTPKELKDSIPFNASTIGSREWTSL
ANMSMSLEEDRNFYVVNDKRLLANGFKVVLYPASSSSVLSHGEIVGMADCIGFYGLNDLK
EILTVVTANPTASLGKSRPLKLQHWLKGETVRMIRSGPNLTNREDVSEKLRQWQKMQGIE
GESVCPSRWTKEKCIHNKLIFTPVYSLDDIPSTPSQN
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaacatctattgtagtgagcaacctcttcaagaatgttccagtaagacga
cagtactataataacccaaagcgacggaaggaggagttaaagaaggtggaggatttgatg
ctgtcgttttgtattgctgctccagaagtccacttaacattagttcatgaaaaaaatact
atgatacagaaaaactcagctaaaggcattcatcattccctcatgaatatttttcctaca
gtatacaagaagttaaaggcagagtcaaaggaagttgaaggtataaaattagaggtttat
cttcctgatcgtggcttctgcgcagatcagactaccagtagatcctgtgctgaccgtctc
tttgtgatagtaaaccgccgtccagttagtcacaaatcaattgaaaagatggtaaaagca
cacttcagccaagcttcagaaggctgccatggtcgctacccaattggagtcatttctctg
gtactttctcctgatgagcttgatgttaatttagagccaaacaagaataaggtcctgttg
aatgatgaggaaactgcactggagtctttaaaagaaatactagaaaatttatatggtcct
ttggagatgacaaagaagtccagtcacaagaaaaatggctcagagtctgtcactgcagac
acagacatcacctgcaccttagcatgtgttacgcaaaagcaaggatcaaacagtaattcc
agagatgaattagacattttggatgagtttttagcagagtctttaaaggaggaagagaaa
caagagaaacagcaattaaaggctccaaatggttgcaaattagaggaaaggctatcaaaa
gattactgcatttacaatgacaaagaaaatgataacttttttgaaaattgcaaccttacc
ccatcaaatgttgataatagaataaccaggcctatgcaagttaaagatagcccaaaccca
aatggtcaacctgctacaagagatgaacagtactctcatactccactcagagataaagtt
ttaagattagctaaacctggtgatgaaagcaggatagaaacagttggcaggtcttatctg
acaagtacacaggaatccagatcacatgtgctagaagatagacggctgccatcactctca
ctcagcacaatccatagtgagggcagcacaccaaagagacctaatgctggtgatgaaaat
ttgagtttcatatgtccttctgaaaatacattttccctcagttctaacttattatctaaa
aagagttcccacactgaaggaaggcaagaagttagcagcgaagattttgataaatgcatg
gagattgcttcacataaaggtgaaagcaagcgcacacaacagtctcccagtaaagacctc
tcaagtcagttacacaaaacaattatgggtgatgatggtatcccagtttttcagataaag
ccacttgaagtgaatgatacttctgagggctcaagtgatgatcatgtacagcctttacaa
agtgctaataaactcaacctttccagtcaagaagttcaacaagagctttctaagggttca
gaaagtgctgtaacatcaagaacagaagtccaagaaaagcagatttctgagactactgaa
aaggagaaaagtgaccttgctggcagttggagcaggggccatgtaaccatgggaggaaat
atacagacagtccagattgtgactcccaagatccaggaagaccatgttcaaaagacccca
gtcaccacaaatgcactcaagcgcctccagccaccatctcctgggaagcagctctctcca
gtacccagcaagaaaatgaagcatgagtcgctgagtccaaccagttatgagtatgtgcat
ggaaaatctgtgaagagacctgccagtgcatttatcctttattcaagagatattagaaga
acagtgttacgtgaaaatcctggaaaagactttgcctttattgctaaaacaatggcagac
aggtggaaagtagctgatgcaaagaccaaggagtactacaaaggcctatctaatgaagaa
agcagaagatatcaagaagaaataagaaagattcgtgagaaccgtagccataatgactcc
atctttgaaaaatcgaacataagtcgggccactttagataagtttatggggccactaaca
ccagttgccattaaagatgatggaaagagacatagaaaagtgcctgagaatgtcaaatgt
ccttggagaaacaaaactaaaaacatggagattgacattggaaagattaagcagcagttg
aagaagagatccagtcaagctaataaaccgggtccatttgagcttattgggtctttggct
aattgtggaggatggctgtgtcaggaaggaggaactattactgccctcaacacaagcagg
ctgcaggaagttgttctgtcttgtactctccttaataccttcaacctcacaccaaaggaa
ttgaaggattccatacccttcaatgcaagtaccattggatctcgagagtggacttcacta
gcaaatatgtcaatgagcttagaggaagaccgtaatttttatgtggtgaatgacaaacga
ttgttggcaaatggttttaaagtagttctctaccctgcaagcagtagtagtgtgctgtcg
catggagagattgttgggatggcagactgcattggattctatgggctgaatgatttgaaa
gagattttaacagttgtaactgccaatcctactgcaagccttggaaagtcaagaccactt
aagctacaacactggttaaagggagaaacagtgagaatgattaggtcaggacccaaccta
acaaatcgtgaagatgtgtcagagaagttaaggcaatggcagaagatgcaaggcatagaa
ggggagtcagtatgtccttcaagatggaccaaagaaaagtgtatacacaacaaactcata
tttacaccagtatactcattggatgatattccttcaactccctcacagaattaa
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