Penaeus monodon (black tiger shrimp): 119587881
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Entry
119587881 CDS
T08784
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119587881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119587881
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119587881
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119587881
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119587881
PBAF complex
119587881
GBAF(ncBAF) complex
119587881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
119587881
NCBI-ProteinID:
XP_037792515
LinkDB
All DBs
Position
23:20189418..20214141
Genome browser
AA seq
1025 aa
AA seq
DB search
MAINPRKDGGPNIKYYESAETVSRFENVKTWLTKNAKKYVAADPPTNKGLSQLVIQLLQF
MEDNCGQKVTKPPMTKLPMKCFLDFKPGGGLCHILSTVYKFKSDQGWRRFDFQSPSRKDA
NIELFREIEKSLVANKCWTKPAVYIHNDVDKELRNELKDIVKRHDGKIVEEEDDATHIVY
EDQDPLDDEFARGAMRRDKQTLFHFYYMPDSYDSWAAGVELDYDPPESPQFPDHQWKVCA
NWLQDLESYNEWMNEEDYEVDENGQKKKHSGCLSVDDTMGLSDPDKKKKAKKRPRSPPSP
RSKRKGGRSNATPGKPVKKTKTEEEEEDLTRDMEDPVAEPAVTEVTTGSKIQPSKGGNYM
DLDEEAADKTEKTEGQPVPDSEDTATDQTHHIIVPSYAAWFDYNAIHAIEKRGLPEFFNG
KNRSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAVMRVHAFLEQWGLINY
QVDADARPTPMGPPPTSHFHVLADTPAGLQSINPPKVNQPSAAKQLMDFDKKPVDKKPEF
GIGTEFGLKLDQYSKKTGALKNKSAASQAREWTEQETLLLLEALEMYKDDWNKVCEHVGT
RTQDECILQFLRLPIEDPYLEDPEAGSGPTPTALGPLAYQPIPFSKSGNPIMSTVAFLAS
VVDPRIAASAAKAAMDEFCRIKDEVPAALLDSHIKNVADNAASNEGKVDPTAGLAKSGIA
GTEPEGEEKKEGEGEAEKKDEAKKDGEKKEEEKKEEEKEKETLEPKKDLGRYTNSKKMTS
LIMFSEKVHMSNQETHKYLRRHKAGIRLEEIKAAPKDYQRPKGFDHIPQVIHEQRKRGAP
QPPISANRPVIKITSTDEKISEYYDFLQEEMRRAAESAQNVESTESKVDLRQEKMKAVKE
GLVNQNMANQEKSEEHLVKWKGAVAFGAGVPPPELVPKGRVTPTTNMKAASDLRQMLRSN
GASAKAKAPPPPAATGPGKVSTDDDVGPYNFRQLLRKTNYAPTDTIRKRQLKRDGVNGYG
SEYQM
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaacccgcgcaaggacggaggccccaacatcaagtattatgagtccgcggag
accgtctcccgcttcgagaatgtcaagacgtggctgacgaagaacgccaagaagtatgtg
gctgcagatccaccaaccaacaagggcttgtcccagttggttattcagctcctacagttt
atggaagataactgtggccaaaaggtcactaaacctccaatgacaaaattacctatgaaa
tgtttccttgacttcaaacctggaggtggactctgccacatacttagcacagtttacaaa
ttcaaaagcgatcaaggatggcgaaggtttgatttccagtcaccatcaaggaaggatgca
aacattgaactcttccgggagattgagaagtccttggtggcaaacaaatgctggaccaaa
cctgcagtctatatccacaatgatgttgataaagaattgagaaatgaactcaaagatata
gtgaaaagacatgatggcaaaattgtagaagaggaagatgatgccacacacattgtatat
gaagaccaagaccccttggatgatgagtttgcacgtggagccatgcgtcgggacaagcag
actctcttccacttttactatatgcctgactcttatgactcttgggctgcaggggttgag
ctagactatgatcctccagaatcaccacagttccctgaccaccagtggaaggtctgtgct
aattggttgcaagatttagagtcctacaatgaatggatgaatgaggaggactatgaagtt
gatgaaaatgggcagaagaagaaacatagtggctgcctgagtgttgatgatacaatggga
ctcagtgatccggataaaaaaaagaaagcgaaaaagcggcctcgatctccaccttctcca
cgttctaagaggaaaggaggcagaagcaatgctacccctggaaagccagtgaagaaaaca
aagactgaggaggaagaggaagatcttacacgagatatggaagaccctgttgctgagcca
gctgtcactgaggttaccactggttccaaaattcagcctagcaagggaggaaattacatg
gaccttgatgaggaagcagctgataagacagagaaaacagaaggacagccagtgccagac
agtgaggacacagccacagatcaaacacatcacatcattgtgcccagttatgctgcctgg
tttgactacaatgccattcatgccattgaaaagagggggctcccagaattctttaatggc
aagaacaggtccaagactcctgaaatttatttggcatacagaaacttcatgattgacaca
taccgattaaacccaacagagtacctgacctctacagcttgtcgccgcaacctggcgggt
gatgtctgcgcagtcatgcgtgtccatgctttcttggaacagtgggggcttatcaattat
caggttgatgcagatgcccgtccaacccctatgggtcctcctcctacctctcatttccat
gtgttggctgacactcctgctggtctgcaatccatcaatcctccaaaggtcaatcagcca
tcagcagctaagcaacttatggacttcgataagaagcctgtagataagaaaccagaattt
ggtattggtacagaatttggtctgaagttggatcagtattctaagaaaactggagctctc
aagaataagtcagcagcaagtcaggccagagaatggactgaacaggaaactctgctttta
cttgaagcccttgaaatgtacaaggatgactggaacaaggtttgtgagcatgtgggtacc
agaacacaagacgaatgtatcctgcagttcctgcgcctccccattgaggatccttaccta
gaagatcccgaggctggcagtggacccacccctacagcccttggacctcttgcttaccaa
cccatcccattcagcaaatcaggaaacccaattatgtccactgtggctttcttggcatct
gttgttgaccccaggatcgcagcgtctgcagccaaggcagccatggacgagttctgcagg
attaaggacgaggtcccagctgctctccttgactcgcacatcaagaatgtcgcagataac
gctgcctctaatgaaggaaaggttgatcccactgccggcttggccaagtccggcattgct
ggcactgaaccagaaggtgaggagaagaaggaaggggaaggagaggcagagaagaaagat
gaggcaaagaaggatggtgagaagaaggaagaagaaaagaaggaggaggagaaggagaag
gagaccctcgaacccaagaaggaccttggacgctacaccaacagcaagaaaatgacgagt
ctcattatgttctccgagaaggtgcacatgtccaaccaagaaacccacaagtacctccgc
cgccacaaggccgggattcgcctggaggagatcaaagccgcgcccaaggactaccaacgg
cccaagggattcgaccacattccgcaagtcatccacgagcagcggaagagaggagctccc
cagcccccgatttccgccaaccgacctgtcatcaagatcacttcaacggacgaaaaaatc
tccgaatattacgatttcttgcaagaggaaatgagaagagctgctgagagtgcgcagaat
gttgagagcaccgagagcaaggtggatcttcggcaggagaagatgaaggcggtgaaggag
ggcctggtgaatcagaacatggcaaatcaggagaagtcggaagagcatttggtcaagtgg
aagggcgcggtagcgttcggcgccggcgttcccccgcccgagctggtgcccaaggggcgc
gtgaccccaaccaccaacatgaaagcggcttcggatcttcgccagatgcttcgttcgaac
ggagcatcggccaaagcgaaggccccgccccctcctgccgccacaggccccggcaaggtc
tcaactgacgacgatgtgggtccttacaacttcagacagttgctgaggaagaccaactac
gctcctacggatactattaggaagaggcagctaaagagggacggagtcaatgggtatgga
tcagagtaccagatgtaa
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