KEGG   Penaeus monodon (black tiger shrimp): 119587963
Entry
119587963         CDS       T08784                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
pmoo  Penaeus monodon (black tiger shrimp)
Pathway
pmoo03020  RNA polymerase
pmoo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119587963
  09124 Replication and repair
   03420 Nucleotide excision repair
    119587963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmoo03021]
    119587963
   03400 DNA repair and recombination proteins [BR:pmoo03400]
    119587963
Transcription machinery [BR:pmoo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     119587963
  RNA polymerase III system
   RNA polymerase III
     119587963
  RNA polymerase I system
   RNA polymerase I
     119587963
DNA repair and recombination proteins [BR:pmoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119587963
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 119587963
NCBI-ProteinID: XP_037792605
LinkDB
Position
23:complement(35785610..35793894)
AA seq 130 aa
MADEEFDGDDVGDDFEEAEEDENLDDXQEGEEDENQMEILAAGEGNQVPTQKRITTPYMT
KYERARVLGTRALQIAMCAPVMVEIEAESDPLQIAAKELRERKIPIIIRRYLPDGSYEDW
GIDELIISDF
NT seq 393 nt   +upstreamnt  +downstreamnt
atggcggacgaggaatttgatggagatgatgttggtgacgattttgaagaggcagaagag
gatgagaacctcgatgatntgcaagaaggagaggaggatgaaaatcaaatggaaattctt
gctgctggggaaggcaatcaggtccccacacagaagcgaatcacaactccatatatgacg
aaatatgaaagagcgagagtgttagggacgagagcattacaaatagccatgtgtgcacca
gtgatggtagaaatagaagctgaatcagacccgctacagattgctgccaaggaattaaga
gagagaaaaattcccatcatcatcagacgatacttacctgatggatcttatgaagattgg
ggtattgatgaactgattataagtgatttctaa

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