Penaeus monodon (black tiger shrimp): 119588233
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Entry
119588233 CDS
T08784
Name
(RefSeq) zinc finger protein ubi-d4 B-like
KO
K13196
zinc finger protein ubi-d4
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119588233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoo03041
]
119588233
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119588233
Spliceosome [BR:
pmoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119588233
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119588233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHDvar_NSD
Lar_restr_allev
zf_RING_Vps8
PHD_4
zf-C2H2_4
PHD_2
TNP-like_RNaseH_C
Motif
Other DBs
NCBI-GeneID:
119588233
NCBI-ProteinID:
XP_037792860
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All DBs
Position
23:complement(37352908..37393050)
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AA seq
540 aa
AA seq
DB search
MAETLVQSNLEKISSFLQDVQYRSLMINSANYNVRLMRERKTRLPFLDSQTGIAQNPSKL
YMSPRHRMPGTVEGQLYVYPSQRWCRRKRSYMALAHQASKEPEGDEHTIVTVENPAAVPQ
EDVAVPYENKEPFYYDETSFLEDEDEEPDDDDDDTYSTRSTPTRKRKKAPKLPKPPKPPS
SRGRKKKEVQPKAPTEGDEETPGKPYECQLCGARYKTRQGLSYHLSHTHKGGRANSGGGR
SRGGGTNPPTPRSEPPSAGGSYQPQAYQPDALAGLAEFQDSYLGYLSAGQDASPTGMPLP
PTTGPRYLLYPCLFSSQSFVMQGLLGDVEPPSMHLALLTHGGGGGGGGVPATSAGNGGGS
ANSRGSKGSNAGWSSGSPSGLIPVSGTTPVVPEVMREASPARLGGHESDQQQYSKSPKPL
QEKGRAQPSPYCDFCLGDAALNKKTGEPEELVSCSDCGRSGHPTCLQFTAHMMISVRQYR
WQCIECKCCTLCGTSENDDQLLFCDDCDRGYHLYCLRPPLQEPPEGEWSCDLCLQQFHSK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgagactctggtgcagtccaacctggagaaaatcagcagttttctccaggatgta
cagtaccgttctttgatgattaacagcgctaattacaatgttcgtcttatgcgggaacgt
aagacgcgccttccgtttcttgattcacaaacaggcatagctcagaacccatccaaatta
tacatgagccctcgacaccggatgcctggcacagtggaagggcaactatatgtttatcct
tcccaacgatggtgtcgcagaaaacgctcttacatggcacttgctcatcaggcaagcaaa
gaacctgagggcgatgagcacaccattgttactgtggagaatcccgctgctgttccacaa
gaggatgttgctgtcccctatgaaaacaaggaacccttttactatgatgaaaccagtttc
ctagaagatgaggatgaggagcctgatgatgacgatgatgacacctactccacaagatca
acaccaaccaggaaaaggaagaaagctcccaaacttcctaagccacccaagccccctagc
agtagaggccgcaagaagaaagaagtacagccgaaagcccccacggaaggtgatgaagag
acccccggcaaaccgtatgagtgccaactgtgtggcgctcgctacaagaccagacagggt
ctgtcctaccacctctcgcacacacacaaggggggtagggctaactctgggggtggtcgg
tccagagggggcggcacgaacccccccacccccaggtctgaacccccttcggctggtgga
agctaccagccccaggcctaccaacctgatgctctggctggtctggcagagtttcaggac
agttacctggggtacctgtcagccggccaggacgcctcgcccacgggtatgcccctcccc
cctaccaccggccctaggtacctgttgtacccatgtttattttcttctcaaagctttgtc
atgcagggcttattaggtgatgttgagcctcctagtatgcatttagctcttctcacacac
ggggggggagggggtggtgggggtgttccagctacgtcggcaggaaacggaggcggatcg
gcaaacagtcgcgggagcaagggcagcaatgcaggctggtccagtggctctccttcagga
ctgatacctgtaagtggcacgacaccagttgtacctgaggtgatgagggaggcgagccca
gcaaggcttggtggccatgagtcagaccaacagcaatattcaaaatcccccaaacctctc
caagagaagggcagagctcagccaagcccttattgcgacttctgccttggagacgcggca
ctgaacaagaagactggcgaacccgaggaactcgtgtcttgctcggactgtggcagatct
ggtcatcccacttgtctccagtttacggctcacatgatgatctcagtgaggcagtatcgg
tggcagtgcattgagtgcaaatgttgcactctctgtggaacctcagaaaatgacgaccag
ttgctgttctgtgacgactgtgaccgaggctatcacctgtactgccttcgtcctcctctg
caggaaccacctgaaggagaatggtcctgtgacttgtgtctacaacaattccactcaaag
tga
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