Penaeus monodon (black tiger shrimp): 119590602
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Entry
119590602 CDS
T08784
Name
(RefSeq) uncharacterized protein LOC119590602
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119590602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119590602
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119590602
mRNA degradation factors
5'-3' decay
Decapping complex
119590602
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
119590602
NCBI-ProteinID:
XP_037795208
LinkDB
All DBs
Position
27:14617342..14631573
Genome browser
AA seq
838 aa
AA seq
DB search
MDTDNFFGFDASLAPDDGCLEGGPEDEEYDALNDETFGSAMVDGDWEEGHEQMATLTEAG
RISNKHKQLQNALRRDDDGGLATDFHNLGLGRFGSQDGNRFGGSEGGRLGQGSAPINIVG
YQSGSTAHHHHMSSALLAGPDLPGSPSNSIWTPSPVLDKLLPVSHHSPSNGVNHSLNQMH
VLNQGGMSQPLGLPSIKTVAELEEELKMQQSRDQTPHGLHMNVVRAEDLERELARQTANK
QPHQQHQHPGMNNQMPNHHQYLPRQGSFSGGMPNNHSQMNRPFQRPFGSPGNFQNQMPHL
PHQHHQQQRYINNFHNNNNKGMFGQHQMQQQHHHHNQPHAHPNQGHEGFNNYHHHHQNSY
NNHYSQQQQQQQNYHHYNNRNPDNRYFNHNGLDSSRGGNERRNMDRRNYDQNRGYDQGKG
RQNNSRDDYSGHSGGRTRRDSEAEWEEWHRMREQDEYCGLMTPREKSWLKNIQAMQLHSD
SPYQDDYYYVMYSVKQQRKREEEVIEIDGLQLLLPDRGKDGGREYEPPRLENSLGKLQVV
SVNAPRKIIDLQVVHLDPSHPTTPLQREMRKHRHLLLHIEKLFNVMMELDDLERKIRLLP
DCPTRDLFQSKSRTLASKLWENIHATPERLVQLLCIRKGKSLLVRLLNWLGPNECEKVVM
TILQNMTLLSKRDTHDHHLELFWPITDHLIDLAVHQQLLEFASALTAQGGGPQKANLVSA
LYNKYGVSLLMALMVRGESLLASLEDSPEWQEFLLAIITGLVAVPDNTGKPSNDSSKTPS
EMPQALPSVAVAASPHRPAQHLARCKAADPAVLKVAQEKMMALTVSHTKPKGQSPAKS
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacaatttcttcggatttgacgcttccttggcgcccgatgatggatgcttg
gaaggaggacctgaggacgaagaatatgatgctctcaacgatgagaccttcgggtcagca
atggtggacggtgactgggaggagggccacgaacagatggccaccctcacagaagccggc
cgaattagcaacaagcacaaacaacttcagaatgctttgagaagagatgatgatggaggc
ttagccacggattttcacaacttgggtctaggacggtttggtagccaagatggaaatcgg
tttggaggttctgaaggtggtaggctgggccaaggcagtgcacccatcaacattgttggg
tatcagtctggatccacggctcaccaccatcacatgagctcggcactcctggctggacca
gatttgccaggctccccatccaacagcatttggacgccctcacctgtcctggacaagctc
ctcccagtcagtcatcattccccttccaatggagtcaaccactccttgaaccagatgcat
gtgctgaaccaaggtgggatgtctcagcctttgggactgccttccattaagaccgtggct
gagttggaagaggaattgaagatgcagcagtcaagggatcagacacctcatggcctgcac
atgaatgttgtgagagcagaagacttagagagggaattggcacgacagacagctaataag
caaccacatcaacagcaccaacatcctgggatgaataatcaaatgccaaaccaccaccag
tatctaccaagacaagggtcattctctggtggaatgcctaacaatcacagccaaatgaat
agaccgtttcagaggccatttggtagtccaggaaacttccagaatcaaatgccgcatctc
ccacaccagcatcatcagcagcagcgttatatcaataacttccataataacaataacaaa
ggaatgtttggccagcaccagatgcagcagcaacaccaccaccacaaccaacctcatgca
caccctaaccaaggccatgaagggttcaataactaccaccaccatcatcagaatagctat
aataaccactactcacagcaacagcagcagcagcaaaattaccaccactacaacaaccgt
aatcctgacaaccgttatttcaaccataatggcttggactcttctagaggtggaaatgag
agaagaaacatggacagaagaaactatgaccagaatcgtggatatgatcaaggcaaaggt
cgccaaaataatagccgtgatgactactctggtcactctggtggacgaacacgaagggac
agtgaagcagaatgggaggaatggcatcgtatgcgggaacaggatgaatactgtggtctc
atgactccaagagagaaatcatggctgaaaaatattcaagcaatgcaactccattctgac
agcccataccaagatgactattactatgtgatgtatagtgtaaagcaacagaggaagagg
gaggaagaggtgattgaaatcgatggactccagttgctcctgcctgaccgtgggaaagat
ggtggtcgggagtacgaacccccaaggctggaaaactcccttggcaagttgcaggttgtt
agtgttaatgctcccagaaagatcattgacctgcaagttgtgcaccttgacccgtcccac
cctactacaccactacagcgtgaaatgaggaaacatagacatctccttttacacatagaa
aagcttttcaacgtgatgatggagttggatgatctggaacgcaaaatccgtctcttgcct
gactgtcccacaagagatctcttccagtcaaaatctcgtacattagcctccaagctatgg
gaaaatatacatgcaacaccagaaagattagtacagttactgtgtataaggaagggaaag
agtttgctggttcgtcttttgaactggctgggtccaaatgagtgtgagaaagttgtcatg
acaatactgcaaaacatgacacttctgtccaagagagacacccatgaccatcacctggaa
cttttctggccaatcacagaccatcttatagacttggctgtgcatcagcagctcttagaa
tttgcatcagctctcactgcacaaggagggggacctcagaaagcaaacctggtgtctgct
ctgtacaacaagtatggtgttagcttgctgatggcacttatggtacgtggtgagagtctc
ctggcaagtctcgaagattccccagagtggcaggagtttcttttagccataatcactggg
cttgtagccgtccctgacaacacaggaaaaccttcaaatgattcaagcaagactcccagt
gaaatgccgcaagctcttccttcagttgcagtggctgcatcacctcatcgccctgcccag
cacctagctcggtgcaaagctgctgacccggccgtcctaaaggtggcccaagagaaaatg
atggcccttacagtcagtcacaccaaacccaagggtcaaagtcctgccaaatcttag
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