KEGG   Penaeus monodon (black tiger shrimp): 119590804
Entry
119590804         CDS       T08784                                 
Name
(RefSeq) roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
pmoo  Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:pmoo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmoo03000]
    119590804
   04121 Ubiquitin system [BR:pmoo04121]
    119590804
Transcription factors [BR:pmoo03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    119590804
Ubiquitin system [BR:pmoo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119590804
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4 zf-C3HC4_4 zf-CCCH_UNK Prok-RING_4 zf-C3HC4_2 zf_CCCH_4 Vesi_VP2 PaaA_PaaC zf-RING_4 zf-CCCH_12
Other DBs
NCBI-GeneID: 119590804
NCBI-ProteinID: XP_037795461
LinkDB
Position
27:34973975..>35015980
AA seq 615 aa
MPIQAPQWTEFLSCPICCHEFDGGQRGPISLGCGHTVCRACLAKLQRNQCPYDQTVMRLE
LDQLPVNVALLSLVGAGTNVEEGDLPPPPPVPPTHTRKYFIAVKCIKDLALFLKPFSGTG
TNGSTSLLSRPMQRKLVTLINCQLVEDEGRARAVRAARSLGERTVTELILQHQNHQQLSA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSALSRKVLVMFVVQRLEPHFPQASKTS
IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPD
QWSSLLYGDTAHKSHMQSIIDKLQTPQSFGQSVQELVIALQRTGDPGQLSSLRPQLELLA
ALDPSPDAPPPGWEPCAAAMEAVRAVVTGLVHFIQHHGNRKLPDAHHPHNAKYKTSMCRD
LTQRGGCPRGNNCTFAHSEDELEKYRNRSRKHGKGIPPPPPTPATKLQPPPTQTYQQLSH
PTQQQQPPQQNVDAVIAPNNGECVAVPVIQKALPVEEIPQAGAVPPAPTSFDPNKFVSIQ
PHTQAMSVLPAPTPAPAIVQPALAATPLYATPVAEYTYSSFPCQPPVFAQPTPGPQPLQS
AAAAAAAVSQYNTCI
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgccgatccaggccccccagtggacggagttcctgtcgtgccccatctgctgccatgag
ttcgatggtggccagcgcgggcccatcagccttgggtgtggacacacagtgtgccgtgct
tgccttgccaagctccagcgcaatcagtgtccatatgaccagactgtaatgagactggag
ctggaccagcttccggtcaacgttgcactgctgtcactggtgggggctgggacgaacgtg
gaggagggagacctgcccccccctccaccagtgcccccgactcacacccggaaatacttc
atagccgtgaagtgcatcaaagatcttgcactatttctcaaacccttctctggcacagga
acgaatggctcgacatcactcctctcccgccctatgcaacggaagctggtcaccctcatc
aactgccaactagtggaagatgagggtagagccagggcagtccgggcagcacgatcgctc
ggggaacgcaccgtcacagaactcattttacaacaccagaaccaccagcagctctctgcc
aacctctgggctgccgtcagagcaagagggtgccagtttctggggcctgcaatgcaagaa
gaggtgctgaaattggtattgttggccttggaggatggatctgctctgtctaggaaagtt
ttggtcatgttcgttgtccagcgccttgaaccacacttcccacaggcttccaaaacaagt
ataggacacgtagtacagttgctttaccgtgcctcgtgtttcaaggtatccaaacgagag
ggcgactcctccctcatgcagttgaaagaggagttccggacatatgaggcactcagaaga
gaacatgatgcccagattgtccagattgccacagaagctggattaagaatagcacctgat
cagtggtcgtccctcttgtatggggacactgctcacaaatctcatatgcaatcaatcatt
gacaaactgcaaacccctcagtcatttggtcagtcagtgcaggaattagtgatagcactt
cagagaacaggtgaccctggacagctatcctccctgcggccccagctggaattactggca
gcgcttgacccctcccctgatgcaccacccccaggatgggagccctgtgctgctgcaatg
gaggctgtccgagctgttgtcacaggacttgtccacttcatacagcaccacggcaataga
aagttaccagatgcacatcatccacacaatgctaaatataagacaagcatgtgccgggat
ctgacacaaagaggggggtgtccaagaggtaacaactgcactttcgctcattcggaagat
gagcttgagaagtacagaaacaggagtcggaaacatggcaaaggcattcctccgccaccc
ccaacacctgcaactaagttgcagcctcctcctacacagacataccaacagctgtcacac
cccacacaacaacaacaacctccgcagcaaaatgttgatgctgtcattgcccccaacaat
ggagaatgtgttgctgttcctgtcatacagaaggctcttcctgttgaagaaataccccaa
gcaggtgcagtaccaccagccccaacctcatttgacccaaataagtttgtttctatccag
cctcacactcaggcaatgtcagtcctgccagctcccacaccagctccagccattgtgcaa
cctgctttggcagcaacaccactctatgcaactccagttgcagaatatacctatagttct
ttcccttgccaaccaccggtatttgcacaacctactcctgggccacaacctcttcaatca
gcagcagcagcagcagcagctgttagtcaatacaacacctgtatataa

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