Penaeus monodon (black tiger shrimp): 119590827
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Entry
119590827 CDS
T08784
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119590827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119590827
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119590827
mRNA degradation factors
3'-5' decay
Pan complex
119590827
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
RecO_N_2
Motif
Other DBs
NCBI-GeneID:
119590827
NCBI-ProteinID:
XP_037795511
LinkDB
All DBs
Position
27:complement(36995771..37016918)
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AA seq
698 aa
AA seq
DB search
MDPLFLNLSLPQQAVAATSTPPVANQVNGLPQESKLATYISNRHQLPATSQPQQQQQEHS
LTKSIAALSLDGVGTRKISVPSVSSIAEFVPGSGGSAGLAHSASTPSFHSFTGLGSPSTP
SSLSFTPMTGTSPAATVASPQRPVSPQGSPSRGRHSPLVGGGDDTSNASSLSTYQENVGG
TTYFFTAQDQQSFTAGAAPSPAPFTAGPPPLVFPPYHILPPTPAHIHHLRAPSNTPHFFM
GDELRHDLLERHALALAHVDPENFPDLPQEVDMYHELVPLEPQPAINKSSMFGYATSVYK
ATNIKTGLHYCLYRIHGYRLSNVKVTQLVDLWKKIQHSSVTQLREVFTTKAFNDNSIVFV
YDYHAGAETLAARHFSSPAALSASGWEGLVNSHGGTSGNSPHDPSSRSLHKSHRHNSGSS
LLPEATLWNYIIQLTGALRTIHTQGLACRTLDPSKILLTDNKSRIRVNCCGILDVLNFDP
NAANPLANMPQYQQEDLVNLGKLMVALACNSILALQRDNIQAALELINRSYSRDLAMLVV
CLLTSQRIKSINDVMPMIGARFYTALESATQRADVYESELSKEIHNGRLFRLLTKLNTIV
DRPELNMDTAWCETGDRYMLKLFRDYVFHQVTDDGRPWLDLGHVVTVLNKLDAGSPDKIC
LMSHDEQNILVTSYAELKRCFERSFAELLQAASSHKAT
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaccctctcttcctcaatctgagcctgccacagcaggctgttgctgccacttccaca
cctccagttgcaaatcaggttaatggccttccacaggagtcaaaactcgccacatatatt
agtaaccgacaccagctgccagccacctcacaaccacagcagcagcaacaggagcattcc
ctcaccaagagcatcgctgctcttagcctggatggggttggaacgaggaaaatcagtgtg
ccatcagtgagtagtatagcagagtttgtgccagggtcaggtggaagtgctggcctggcc
cactctgcctccacgccctccttccattcattcactgggctcggctcgccctccacacca
tcctcgctgagtttcacccctatgaccggcacttccccagcagccacagtggcatctccc
caacggcctgtttctccccaagggtcaccaagcaggggacggcactcccctctggtgggg
ggtggagacgacacaagcaatgcttccagtttgtccacctaccaagagaatgtagggggc
accacctacttcttcactgcccaggaccagcagtcattcacagctggggcagctccttcg
cctgccccattcacagctggtccacctcccctggtgttcccaccttatcacattctaccg
cccacacctgcccatatccaccacttgcgtgcacccagcaacacgccgcacttctttatg
ggggatgaattgcggcatgacctgttggagagacatgctctggctctggctcatgttgac
ccagagaattttcctgatttaccacaagaggttgacatgtaccatgagttggtgcccctt
gaacctcagcctgcgataaacaaatcatctatgtttggatatgctacctccgtttacaag
gcgaccaatatcaagacagggcttcattactgcctttatcgtattcatggctatcggctg
agtaacgtgaaggtcacccagctggtggatctgtggaagaaaattcaacattccagtgta
actcagttgcgagaagtgttcaccacgaaggcctttaatgataactcaattgtgtttgtc
tatgactatcatgccggagcagagaccttggctgctcgtcacttctcctcgccagcagca
ctgagtgccagtgggtgggaggggcttgtcaactcacatggagggacaagcgggaacagt
ccccatgacccatcgtccaggagcttacacaagagccatcgccacaattccgggagcagt
ctgttgccagaggcgaccctctggaactacataatccaactcactggggcattgaggacc
atccacactcagggtctcgcttgtcgcacactagacccatccaaaattctccttacagac
aacaagtcaagaatcagggtgaactgctgcgggattcttgacgtgttaaactttgatccg
aatgctgccaaccccctggccaacatgcctcagtatcagcaagaggatttagtgaacctt
gggaaactaatggtggctctggcatgcaattccattctggcgctgcaacgagacaacatc
caggccgctctggaactcatcaacagatcatactcacgggatttggctatgttggtagtt
tgtttgctcacctctcagcgcatcaaaagcattaatgatgttatgccaatgattggtgcc
aggttctacactgctctagagagtgccacgcagagagcagatgtttatgagagcgagctg
tccaaagaaatacacaatggtagacttttccgtctcttgacaaagttgaataccattgtt
gatcgaccagaactcaatatggacacagcctggtgtgagacaggagatagatatatgctg
aaactcttccgtgattatgtgttccatcaggtaactgatgatggaagaccgtggttggac
ttgggacatgtggtgactgttctgaataagttagatgcagggtctcctgataagatttgt
ttgatgtctcatgatgagcaaaacatcctggtgacctcctatgcagaattaaaaaggtgc
ttcgaacgctcctttgccgagctgctgcaggcagcatcttcacataaggcaacataa
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