Penaeus monodon (black tiger shrimp): 119590999
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Entry
119590999 CDS
T08784
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119590999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119590999
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119590999
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119590999
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
119590999
NCBI-ProteinID:
XP_037795659
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All DBs
Position
28:34607763..>34610800
Genome browser
AA seq
193 aa
AA seq
DB search
MKEGNGHIVTLPGQRICEATSSHVAGEGTYIFNKYIYASQAGRVIVEPRGGLQVVKVSLG
LQGTVMPEVGSIVTCRVLTVNPNQASVSILCVGFHLLHTPVSGTVRKQNVRDHQIDLVEM
YNCFRPNDIILATVLSLGDVRNYELSTAGTELGVVTAYCEEGHPLVPASWTRMKCKCRSE
LRKVAKVVPPKNN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaggaaatggacacatcgtcacccttcctggccagagaatatgcgaagcaaca
agtagtcatgtggcaggggagggaacttacatattcaacaagtacatctacgcatcccag
gctgggagggtgattgtggagccaagaggaggtctgcaggtggtgaaggtgtctttggga
ctccaagggacagtaatgccagaggttggaagtatcgtcacatgccgagtcctcacagtg
aatccaaaccaggcctccgtatcaattctctgcgtgggattccatctgctgcatactcca
gtgtcaggaacagtcaggaaacagaatgttcgtgatcatcaaatagacttggtggagatg
tacaactgctttagacccaatgacattatcctggcaactgtactttctctcggtgatgta
agaaattatgaactatcaactgctggcacagagttaggagttgtgacagcctactgcgag
gaagggcatcctctcgttccggcctcgtggacacggatgaagtgtaaatgccgttctgaa
ttaagaaaagtggcaaaagttgttccaccgaaaaacaactga
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