Penaeus monodon (black tiger shrimp): 119591430
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Entry
119591430 CDS
T08784
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119591430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119591430
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119591430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
MOR2-PAG1_N
CNOT1_HEAT_N
Spt4
Motif
Other DBs
NCBI-GeneID:
119591430
NCBI-ProteinID:
XP_037796099
LinkDB
All DBs
Position
28:25418408..25441994
Genome browser
AA seq
1630 aa
AA seq
DB search
MVNIEDFELVSGKALWGVICGTYVLPSDEVVGAELQLAVEHLRHGLSAYADPSGDHYEKW
EKTAQVSKAEKAFVKKLSVLLKLSATHSWQMFQLFLLNEYRGAEASLSEVLASQRDEETF
LGQLWSFYLADRLHLIRCLRHVVANTANPQHPYQSLFHNFMQDVLDKDGTLGESLVNQVM
LCTKMAPPTPQSHGPHLPPHGPTTWLAHHLAELREVLATLLVYYGSTSQSPTPETFLKLV
QLAQGGGLGGRPEIQEGIRESHAPLVEALDGAHVLLLTLIINADSPTSDNKLCDSAWVKK
LDPTMAGLGARTPHLAPLLAWAVLQLRASDGGLKGNPRMYNKLAQRAVHGNVFAYLQTAL
NNTSIQGDELLVRLASSVVYSLMCAAAGCLDLERMGCLSVLNTLAKRCLAQDPPAQLFWA
EEGGGAGLLLPQAIEVFPYDVQPLLSLMSALAVANTESCQKVIELLTELPNLSWVLTQSD
HRSIQIRGNDCVTTAPLQVLPSLTIAADTRGTLISTNPPVVTWHMPTNAWQALLGVMKLL
DEEVSGGASIPDQKLMETVSATLRLLASLLTTLPDHLPAFVHFIQQTIVLLRRISQVSRP
PGQLVATLMEFLTEVSTQDPKLVWNELESCPLLPFLAAPHKSGAKKGKVDPFLGYRAGAL
RALVCGEEAATGKYPILSSYTRLLICGVKDGFSSGSVNGGVVFVAREVTGALLRWCYSSQ
EERDTVLNLCLALLHHTLEASDIDTSVRDLVVKQLVDSSSAGQTLLSVVVGGANLETAIN
HPMHSPISTHAHRLTRTAQMALSILHRLVGEDTSMDGLNQLLRAAPTPNTPLSGGRLHSS
TSPHLALTVALYAHQRLNPRLSYLALRTLTRFAQKLNVPLVACLGGEAEGIRDALLRRLD
SATEDVRVKVALLRLLTASTTRQQGLTNAFLTPPEKLLDPLTSLFNPSTSTSSGRELGLA
VVELVDALWSEKYNTATTYLQDKSDFWQALIQPLTKEKTNEVNNAIVGHTMRVLARQVFS
SDAKPSACLKSAMDKLCDPVKGTICQWSDHIVSSLEDSSQLSDDVTELLLPAWRDLVVVM
VARAKSWLADKQKVSIASDILYALLNQLEKESMDEKLALLLAELYLALVKHCGKNLIEKE
DCFKGVGKLLIKVQEAVMTTPTHSQMLILGATLRMVKLTEPSAQSQGQALALLGPVTWIV
QQHGRLAGSSSSPSLSSCTTAATLSLAAALLHQCLLRCAPDAARPFLAHTPVVPALLHAV
ETYMQCGEEEVVGELLLLLSTLSRVAELSDDLSTQTLSSTLTLTIPPSKTALLSEVVWGV
VWGVRREGVGGVEGGVNVAAVHLGALCGALGAPHRQPALALASATLVSSLAPYASMWIVT
HPASYSQLTAATTRCIHITTQLLHTPRVVEMELSGDRSSSSSGGSSEAPAIAPQITAATT
DVLNRMLQVVCACLSALIALGPDLTDLLCGPGIDVGAWALFFHPSFRPVSAHDPNAQPSL
ASLTSVLDLYDSHASKESRGLSPCRGGAPEVGLCVQVLAVTAEKALLLLLTQSTLALMRP
ETSPRDSLRVRHGLADEMNSFFTRWLGRRPAASPLPSSSSTASGTSCTAQIDLTYLRLAQ
QLVARLASNK
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatatagaggactttgagcttgtcagtggaaaggcgctgtggggtgtcatatgt
ggcacatatgttcttccttcagatgaggtggttggcgcagagctccagctggcagtggag
cacctccggcatggcctctcagcttatgctgaccccagtggggatcactatgagaaatgg
gagaagacagcacaggtgtcaaaggcagagaaggcatttgtcaagaagctgtcagtactt
ttgaaactctcagcgacacacagctggcagatgttccagctgttcctcctgaatgagtac
cgaggggctgaggcctcactctcggaagtgttggccagccagcgtgatgaggagaccttc
ttgggccaactttggagcttctacttggccgaccgactccacctcatccgctgcctaaga
cacgtagtggccaacacagctaacccacagcacccataccagagtctgttccacaacttc
atgcaagatgtcctggacaaagacggcacccttggggagagcctcgtcaaccaggtaatg
ctgtgcactaagatggccccacccacgccccagtcccatggtccacacctccctccacat
ggccccacaacctggttggcccaccacctggccgagctgcgtgaggtgctggccacgctg
ctcgtctactatgggagtacatcacagtcaccaactcctgaaacatttctcaaactggtt
cagttggcacagggaggtggccttggaggacggccagagattcaggagggcataagggaa
agtcatgccccactggttgaagctctcgatggtgcccacgtcctgctcctgaccctcatc
atcaatgctgactcacccaccagcgacaataaactctgtgatagtgcctgggtcaagaaa
ctagaccccaccatggctggcttgggagcccgtacaccccacctggcccccttgctggct
tgggctgtcctacagctcagggcatcagatgggggtctaaaaggcaacccaaggatgtac
aacaagctagcacaaagagccgttcatggcaatgtgtttgcctacctccagacagcactc
aataatacgtcaatacagggagatgaactgctagtgcggcttgcatcttcggttgtgtac
tccctcatgtgtgctgcggcaggatgccttgacctagagcgaatggggtgtctttctgtc
cttaataccctggccaagaggtgccttgctcaagaccctccagcacaactcttttgggct
gaggaaggtggtggagctggactgttactgccacaggcaatagaggttttcccgtatgat
gttcagcccttgctgtccctcatgagtgctctggctgttgctaatacagagagctgccag
aaggtaatagaacttctgacagagctgccaaacctatcctgggtgctgacacaaagtgac
cacaggagcattcagatcaggggcaatgactgtgtaaccacagctcctctgcaggtcctt
ccatcattgaccattgcagcagacacacgtggcaccttgatctccacaaacccacctgtt
gtaacctggcacatgcccacaaatgcatggcaagctcttttaggggtcatgaagcttctt
gatgaagaggtaagtggaggggcaagcattcctgaccagaagctcatggagacagtatca
gccacgctccgccttctggcttccctcttgactacactccctgatcatctgcctgcattc
gtccacttcatccagcagacaatagtgctgttacgcagaatatctcaagtcagtcggcca
ccgggacagctggtagcaacactcatggagtttctgacagaggtttcaacacaggaccca
aagttggtgtggaatgaacttgagagctgccctctcctacccttccttgctgccccacat
aaatctggagcaaagaaagggaaagtagatcccttccttgggtatcgtgctggtgccctc
agagccctagtctgcggtgaagaggcagcaactgggaaatatcccatcctgagctcttac
acgcgcttattgatttgtggtgtgaaggatggcttcagcagtgggagtgtaaatgggggt
gtggtgttcgtagcaagggaagtgacaggagccttgctaagatggtgctacagttcccaa
gaagagagagacactgtcctcaatctctgtctggcccttcttcaccacactctagaagcc
tcagacattgataccagtgttcgtgacttggtggtcaaacaattggtggatagtagcagt
gctggacaaactctgctgtcggtggtagttggcggagctaacctggagacagctatcaac
cacccaatgcactcgcctatctccacccatgcacacagactcacacgaacagcccagatg
gctctctccatcttgcacaggcttgtaggcgaagacaccagcatggatggcctaaatcag
cttctccgtgcagctccaacccccaatacgcctctgagtggagggcgcttgcatagtagc
acctcccctcatttggctttgactgttgctttgtatgcacatcaaaggcttaatccacgt
ctctcttaccttgctctgcgaactctcaccagatttgctcagaaactcaatgtgccatta
gttgcctgtctgggtggagaagctgaagggattcgagatgctcttctgcgccgattagac
tctgcaactgaagatgtgcgtgtgaaagttgctctcctacgtctcctaacggcatctacc
acacggcagcaagggctaaccaatgccttccttacacctcctgagaaactcttagatcct
cttacatcactctttaatccttctacctctacgtcatcgggaagagagttgggcttagca
gtcgttgaacttgtagatgccctctggagtgagaaatataacactgcaacaacctacctg
caagataaatcagacttctggcaggcgctgattcagcccctcacaaaagagaagacaaat
gaagtgaacaatgctattgttggccacacaatgcgggtgcttgctcggcaggtcttctcg
tctgacgccaaacccagtgcttgtctcaagtcagccatggataaactctgtgatccagtc
aagggaaccatttgccagtggtcagatcacatagtaagcagcctagaggactccagtcag
ctcagcgatgacgttactgagttgttattacctgcttggcgagacctggtggtagtgatg
gtagctagggccaagtcctggctggctgacaagcagaaagtaagcatagcaagtgacatt
ctatacgccctcctgaatcagctggagaaagagtccatggatgaaaagctggctcttctc
ctggccgagttgtacctggctctagtcaaacattgtgggaaaaacctcattgaaaaggag
gactgcttcaagggtgtgggcaaactgttgatcaaggtgcaggaggcagtaatgacgaca
cccacacactcccagatgctcatcctcggtgcgaccctcaggatggtcaagctcacggaa
ccatctgcacagtcccaaggccaagcgcttgctctcctgggccctgtgacgtggatcgtg
cagcaacacgggaggctggcaggctcctcctcctccccctctttgtcttcctgcacaacg
gcggctaccctgagcctggctgcagcactcctccaccagtgcctgctgcgttgtgcccct
gatgctgcccgccccttcctggcccacacgcctgttgttcccgcactgctgcatgctgtt
gagacatatatgcagtgtggtgaagaagaagtagtaggggagctgctcctgctgctgtca
acactgtccagggtcgctgagctgtccgatgacctctccacacagacactctcatctact
cttactctcacaattcccccatccaagacggccctgttgagcgaggtggtgtggggtgtg
gtgtggggtgtgcgtcgtgagggcgtgggtggtgtggagggcggcgtaaatgtagcagca
gtccacctgggggctctgtgtggggcccttggtgcaccccaccgacagcctgccctcgcc
ctcgctagtgctacccttgtgtcatcactagccccctatgcctcaatgtggattgtcacc
catccagcctcctactcccagctcactgccgccactacaaggtgcattcacatcacaaca
caactgctccacacacctagggttgttgagatggagctgagtggggacagaagcagcagc
agcagtggagggagctcggaggcacctgccattgcaccgcagataacagccgccacaaca
gatgtccttaatcgcatgctgcaggttgtgtgtgcgtgcttgagtgctcttattgctctg
ggacctgacctgactgacttgctctgtggacctggcattgacgtaggtgcatgggcgtta
ttcttccacccttcattccgccctgtatctgcccatgacccgaatgcccagcccagcttg
gcatctctcacctccgtgctggatctctatgacagccatgcgtcaaaggagagccgaggg
ctgtcgccatgccgtgggggagcaccagaggttgggctgtgtgtacaagtattagcagtg
actgcggaaaaggcgctactgctgctgctcacccagtccactctggccctcatgcgacct
gaaacatctccgagggacagcctgcgtgtgcgccatggccttgctgatgagatgaattcc
ttcttcacccggtggctaggaaggcgtccagcagcatcacctcttccaagcagcagttcg
acagcctcgggaaccagctgcaccgcccagatcgacctcacgtacctgcggcttgcccag
cagctggtagcaaggcttgcttccaataagtga
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