Penaeus monodon (black tiger shrimp): 119591555
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Entry
119591555 CDS
T08784
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119591555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119591555
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119591555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
119591555
NCBI-ProteinID:
XP_037796235
LinkDB
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Position
28:complement(35089341..35123864)
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AA seq
504 aa
AA seq
DB search
MKKDGAWRDMMAHPGGGNGPRGRNIPHDGEEKGSFEVMLLGPDSPVGRRTGGLRAPNIPY
EGDEQGKMFVGGLSWETTQESLQRYFGQYGEVIDCVVMKNSETGRSRGFGFVTFADPNKV
DVVLKSGPHELDGRTIDPKACNPRSMQKQKKNGNWPKVFLGGLPSNLTETDLRNFFSRYG
AVMEVVIMFDQEKKKSRGFGFLSFETEEAVDRAVAEHFVNINGKQVEIKKAEPRDASKAQ
EESGQWGTPPDNQWGMPVGPPGIPGLNNGMGPGNMGPPLGPPLGPHNSQMGGHMGTQGMV
QGPYHQGWGTPPQQQGYPPQGYGAPQGPQGYQGWGAGQQLQQWGAPNYGSPGGQQYGSFG
PLEGGTWGWTTPTSPSTPQPHECDPYGRNAPLNALVTGAPGAPSPNLAAAAGPQPGGKAS
ADYSSWGQYNYNQMSGENSAVAAAAAAFNHGRGYNDGGAQGQAPAHQGAARYGSESLMGQ
QAGDPHTNGRPSPSNAQPSPYIQL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggacggtgcatggcgcgacatgatggctcaccccggcggtggcaatggaccc
agaggcaggaacattccccacgatggggaggagaaaggttcttttgaagtgatgttgctg
ggccctgactcccctgtggggcggcgcaccggtggactgagggccccaaatatcccttac
gaaggcgatgagcaaggaaaaatgtttgttggtggcctgtcctgggaaacaactcaggag
tccttgcagcgttactttggtcagtatggagaagttattgactgtgtggtgatgaagaac
agtgagaccggaaggtcaaggggtttcggctttgtgacatttgcagaccccaacaaggtg
gatgttgtactgaaaagtggccctcatgaactggatgggcgtacgattgatcccaaagct
tgcaatcctcgcagcatgcaaaagcaaaagaaaaatggaaattggccgaaggtgtttctc
ggaggtttaccctccaatcttacagagacagatctccgcaatttcttctctcgctatggt
gctgttatggaggttgtcataatgtttgaccaggagaagaagaaatcaagaggctttgga
tttttgtccttcgaaacggaagaagctgtggatagagcggtggcagagcactttgtcaac
attaatggaaagcaggttgaaattaagaaagcagagccccgtgatgccagcaaggcacag
gaggagagtggtcagtggggcacaccacccgacaatcagtggggcatgccagttggccca
cctggcatacctggcctcaacaatggcatgggacctggcaacatgggtccaccactgggc
cctccccttggcccgcacaacagtcagatgggaggccacatgggtactcaaggcatggtc
caagggccctaccatcaggggtggggaacaccaccgcagcagcagggttatcctccacaa
ggatatggtgctccacaaggaccacagggctatcagggctggggtgctggccaacagctg
cagcagtggggtgctcccaattatggatctccaggcgggcagcagtatggcagctttgga
ccattggaggggggcacttggggctggacgacccctacttctccctccacacctcagcca
cacgaatgtgatccctatggccgtaatgctcctctaaatgcccttgtgactggagctcct
ggtgccccatccccaaatctggctgctgctgctgggcctcagccagggggcaaggcatca
gcagactacagttcttggggtcagtacaactacaaccagatgagtggggaaaactctgca
gtagcagcagctgctgcagcattcaatcacggacgtggatacaacgatggtggggcacag
ggacaagcacctgcccaccagggggcagctcggtatggtagtgagagcctcatggggcag
caggctggggatccccacaccaacggacggccctcacctagtaatgctcagccatccccg
tacatccagctatag
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