Penaeus monodon (black tiger shrimp): 119591949
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Entry
119591949 CDS
T08784
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmoo03009
]
119591949
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119591949
Ribosome biogenesis [BR:
pmoo03009
]
Eukaryotic type
Pre-60S particles
Helicases
119591949
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
119591949
NCBI-ProteinID:
XP_037796632
EnsemblRapid:
LOC119591949
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All DBs
Position
29:complement(10882282..10887923)
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AA seq
578 aa
AA seq
DB search
MDTSWASLKVKLIPPITRTLQDFKFKSMTPVQAACIPMLLSHKDVVAEAVTGSGKTLAFL
IPVLQILERREQKLKKHEIGALVVSPTRELATQIHEVLQGFLKHLPDRTSMLAVGGSYPS
EDVDRFKANGAHILIGTPGRLEDLLGRQIADCGSFADGVRALEVLILDEADRLLDMGFHS
TISTIIAYLPKQRRTGLFSATQTSDVVTLVRAGLRNPVQVKVKEKDATGDERTPKSLMNF
YMECEPDKKFATLLAVLREKRSEKCMVFFPTCACVEYFTIILKETLKNMKILSLHGRMKD
KRFKIFDEFRSLASGVLLCTDVMCRGVDIPRVDWVIQFDPPSSATAFVHRCGRTARIGNE
GNAIVMLLPSETDYVEFIQINQKVTLRRLRPPAEVPDLLAKMRRMQLKDRNVMDKANRAF
VSFIKSYAKHECSLILSVKELNFGHAATSFGLLRMPKMPELKDTTVPDFTPVEVDFNAIP
YKDKQREQSRQRKMQEYEQTGEWPGMKPRKRKTEAWSEQKDKKRRKQRKKELKEMRAKNR
FTAEEQDEVNEDFRLLKKLQKGKINSSAFDKHFGLDDD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggatacctcatgggctagtctgaaggtgaagctcatccccccgatcacgcgcaccctg
caggacttcaagttcaagagcatgacgccggtgcaggcggcatgcatcccgatgcttctc
agccacaaggacgtggtcgccgaggccgtgacgggcagcggcaagacgctggccttcctg
atcccggtgttgcagatcctggagaggcgcgagcagaagctgaagaagcacgagatcggc
gccctggtggtgtcgccgacgagggagttggccacgcagatccacgaggtgctgcagggc
ttcctcaagcacctgcccgaccgcacgtccatgctggcggtgggcggctcgtaccccagc
gaggacgtcgaccgcttcaaggcgaacggggcgcacatcctcatcgggacgcccgggagg
ctggaggacctgctgggccgccaaatagcggactgcgggagcttcgcggacggcgtgcgc
gccctcgaggtgctcatcctcgacgaggccgacaggctgctggacatgggtttccactcc
accatcagcaccatcatcgcctacctgcccaagcagaggaggacgggcctgttctcggcc
acgcagacctcggacgtcgtgacccttgtgcgggcaggcctcagaaacccagtgcaggtc
aaagtcaaggagaaggacgccacgggcgacgaaaggacgccaaaaagcctcatgaatttt
tacatggagtgtgaacctgataagaagttcgcaaccctcctcgctgtgttgagggagaag
aggagtgagaagtgcatggtgttcttccccacgtgtgcgtgtgtggagtactttacgatt
attctgaaggagaccttgaagaacatgaagatcctgtccctgcacggcaggatgaaggac
aagagattcaagatcttcgacgagttccggtccctggcgagcggcgtcctgctgtgcacg
gacgtgatgtgccgcggcgtggacatcccccgcgtggactgggtgatccagttcgacccg
ccgtcgtccgccacggccttcgtgcaccgctgcggccgcaccgccaggatcggcaacgag
ggcaacgccatcgtcatgctgctcccctcggagacggactacgtggagttcatccagatc
aaccagaaggtgacgctgcgccgcctgaggccgcccgccgaggtgcccgacctgctggcc
aagatgcggaggatgcagctcaaggaccgcaacgtgatggacaaggccaaccgcgccttc
gtgtccttcatcaagtcgtacgccaagcacgagtgcagcctcatcctgagcgtgaaggag
ctcaacttcggccacgcggccaccagcttcggcctcctcagaatgcccaagatgcccgag
ctcaaggacaccaccgtgccggacttcacgccggtcgaggtcgacttcaacgcgatcccg
tacaaggacaagcagagggagcagagccgccagcggaagatgcaggagtacgagcagacg
ggcgagtggccgggcatgaagccgcggaagcgcaagacggaggcgtggtcggagcagaag
gacaagaagcgcaggaagcagcggaagaaggagctcaaggagatgagggccaagaacagg
ttcacagccgaggagcaggacgaggtgaacgaggacttccgcctgctcaagaagctgcag
aaggggaagatcaacagctcggccttcgacaagcactttggcctcgacgatgactga
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