Penaeus monodon (black tiger shrimp): 119592183
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Entry
119592183 CDS
T08784
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03030
DNA replication
pmoo03410
Base excision repair
pmoo03420
Nucleotide excision repair
pmoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119592183
03410 Base excision repair
119592183
03420 Nucleotide excision repair
119592183
03430 Mismatch repair
119592183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmoo03032
]
119592183
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119592183
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119592183
DNA replication proteins [BR:
pmoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119592183
DNA Replication Termination Factors
ELG1-RFC complex
119592183
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119592183
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119592183
Check point factors
HRAD17(Rad24)-RFC complex
119592183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_14
AAA_11
AAA_24
RuvB_N
AAA_assoc_2
AAA_16
ResIII
AAA_5
DEAD
DUF815
RCF1-5-like_lid
AAA_7
AAA_30
AAA_19
BrkDBD
PhoH
ATPase_2
Mg_chelatase
Cas_NE0113
Thioredoxin_6
bpMoxR
AAA_28
FtsK_SpoIIIE
AAA_3
AAA_2
Motif
Other DBs
NCBI-GeneID:
119592183
NCBI-ProteinID:
XP_037796940
LinkDB
All DBs
Position
29:complement(33351907..33364388)
Genome browser
AA seq
334 aa
AA seq
DB search
MGLQDEDRSRNLPWVEKYRPKTLQDLISHEDIISTIQHFIDEDHLPHLLFYGPPGTGKTS
TILACARRLYSPKEFNSMVLELNASDDRGINVVRDQILSFASTRTIFKSGFKLIILDEAD
AMTNDAQNALRRIVEKFTENVRFCLICNYLSKIIPAIQSRCTRFRFGPLSSEQILPRLNH
VIEEEGVQVTEDGKKALLALSGGDMRKVLNILQSTAMAYNEVSEDNVYTCVGHPLRSDIT
NIINWMLNEDFQLAYKNVSELKTAKGLALQDILTEIHTYIHRIDFPVEVRIHLVERLSDI
EVRLCSGASEKIQLSAVLAAFAQAKHMVATQAAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcaggacgaggaccgtagcagaaacctcccgtgggttgagaaataccgtccc
aagactttgcaggatttgatatcacacgaagacatcatatccacaattcaacatttcatt
gatgaggaccacctaccccatttgctgttctatggaccccctggaaccggcaagacatct
actatcttggcctgtgccaggagattgtattcgcccaaagaattcaactctatggtcctg
gagttgaatgcttcagatgaccgtggtattaatgttgttcgagaccagatccttagcttt
gcaagtactcgaaccatttttaaatctggctttaagttgattattcttgatgaagctgat
gcaatgactaatgatgcccagaatgcgcttaggagaattgtggagaagtttacagaaaac
gttcgcttttgcctcatctgcaactaccttagtaaaataattccagccattcaatcacgc
tgtacacgcttcagatttggtcctttatcttcagaacagatccttcctcgcctcaatcat
gtcattgaggaagaaggtgttcaagtgacagaggatggaaagaaagcactgctagccctt
tcaggaggggacatgcggaaggttctaaacattttacagtccactgccatggcttacaat
gaggtctctgaggataatgtgtacacctgtgttggtcacccccttcgttcagatatcacg
aacatcatcaactggatgctgaatgaagatttccagcttgcctacaaaaatgtttctgaa
ctaaaaactgccaaaggacttgcattacaagacatcttaacagagattcatacctacatt
cacagaattgattttccagtagaagtaagaattcatcttgtggaacgcctatcagacatt
gaagtgcgactgtgctctggggcatcagaaaaaatacagttgtcagcagttctagctgcc
tttgcccaagcaaaacatatggtagcaacccaggcagctgcttag
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