Penaeus monodon (black tiger shrimp): 119593366
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Entry
119593366 CDS
T08784
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119593366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119593366
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119593366
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF6482
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
119593366
NCBI-ProteinID:
XP_037798224
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All DBs
Position
32:4121607..4142815
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AA seq
883 aa
AA seq
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MRRSAAPSQLLKRAQFRPPFANQPPAKRPCLERPHSAQEKQSESQESEAPPESASKGPLR
TTSDILSLLKKPQNTQAGNQNDKPSNLSSGASAVNYPLSETNSYRAPGLSSFKSVGLKPG
GRQASMGESLAQGGTENEQPQETRYFSVVWCKLSRKKHKNWEGDAVLIVKGRSVILKDTE
GKEIGRASGYKMTDLATLEEGNTLPVGGKEIEIQGVISAESYATGQCFMAGVSQASTVPA
SPAVAPRPKPKPFRLPTLGRGPSRAGGPQMECSSLFDPTKPNALVMPRPPPQHQWKHNCA
SAPVVDVVIDPYISGKLRPHQQNGVIFLYECVMGYRLNDNYGAILADEMGLGKTLQCITL
IWTLLNQAEDFIKQQHSAVMIISYEMFMRCAEVIDIYNFDILLCDEGHRLKNANIKTTSL
LCSLNTRKRIILTGTPIQNDLQELYALVDFVNPGVLGTSSSFRRIYEEPIIAYQQPMATD
SEKELGETRAAQLNRTTSLFILRRTQEIINRYLPSKVEYVVFCQPSETQLMLYDEIVGCK
TLRQCLNSSDVGDHLSAIMALRKLCNHPALLAQDNEQHSHKEMAMELASLLPEHIKYNQF
DEADSGKLAVVSCILWSLAEAGNEKIVLVSNYTSTLDMLAILCERYNYQYLRLDGSVPTG
KRQELVDRFNNKYSKDFVFLLSAKAGGVGLNLIGASRILLYDIDWNPATDLQAMARVWRD
GQQKKVYIYRLLMTGSLDEKMYQRQVRKQGLSGAVVDARDSERVHFSTKELKDLFTLHSN
TACLTHDMLQCSCDLTGKTIALPNPEENTEPERSCQLGDHGQYRSSSNTTMDQLQKWYHS
AAPFSPEIISDPCLEAASDFITFLFHSVSDSSVKERSAVQTEA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatctgcagcaccgtcacagctactgaagagagcacagttcagacctcctttt
gccaatcagccaccagccaaacgaccttgtcttgaaaggccacattcagctcaggagaaa
caatcagaatctcaggaaagcgaagccccaccagagtcagcctccaaaggaccccttcga
accacatcagatattctatccttgttgaagaagccccagaatacccaagctggtaatcaa
aatgataaacctagtaacttgtcatcaggtgcctctgcagtcaattaccctttaagtgaa
acaaatagttacagagccccaggtttgtcctcattcaagtctgttgggctgaaaccagga
ggaaggcaagcatccatgggtgaaagtttggcccaaggaggcacagaaaatgagcagcca
caggaaacaaggtatttctctgttgtatggtgcaagctatcacgcaagaaacacaagaat
tgggaaggagatgcagttctcatagtgaaaggaagatcagttatacttaaggatactgaa
ggaaaggagattggtcgtgcatctgggtacaagatgacagatttagcaacattagaagag
ggaaacacccttccagttggaggcaaggaaattgagattcaaggtgtaattagtgctgag
agctacgcaactggacagtgctttatggcaggagtcagccaagcctcaacagttcctgct
tcaccagctgttgccccacggcccaagcctaaaccatttcgccttcccacccttggacgt
ggtcccagtcgtgctggtggaccacaaatggagtgcagtagtctctttgatccaacaaag
cctaatgcacttgtaatgccaagacctccaccacaacatcagtggaagcacaactgtgct
agtgctcctgtggtagatgttgtgattgatccctacattagtgggaaattgcgaccccat
cagcagaatggagttatcttcctgtatgaatgtgtcatgggatacagattgaatgataac
tacggagcaattttggctgatgaaatgggacttggcaagaccctacagtgtatcaccttg
atatggacgcttctaaatcaggcagaggatttcatcaaacaacaacactcagctgtgatg
attatatcttatgaaatgttcatgagatgtgctgaagtaattgacatttacaattttgac
atattgctctgtgatgagggacacaggcttaagaatgccaatatcaagacaacttcacta
ctctgtagtttgaacaccagaaaaaggatcattctaacaggaactcccattcagaatgat
ttgcaggaactctatgccctagtagactttgtgaatccaggagtccttggtacatcctcc
tctttcagacgaatatatgaagaacccataattgcataccagcaaccgatggcaacagat
agtgagaaggaattaggagaaacacgggcagctcagcttaataggactacatccctcttt
atcctcagacgtacacaggaaattattaacaggtatcttccatctaaggttgagtacgta
gtgttctgccagccctctgaaacacagttgatgctttatgatgagattgttgggtgcaag
actcttcgacagtgtttgaatagtagtgatgtgggagaccatctgtcggccattatggca
cttcgcaaactttgtaaccatcctgcacttttagcccaagataatgagcaacattcacac
aaagaaatggcgatggaattagccagtttgcttcctgaacacataaaatataaccagttt
gatgaagctgatagtggaaaattggctgtagtgtcatgcattctatggtcacttgctgaa
gctggtaatgagaaaattgttcttgtatccaactacacatcaaccttagatatgctggct
attttatgtgagcgctacaactatcagtacttgagactcgatggttcagtcccaacaggg
aagaggcaggaactggtggacagattcaacaataagtattctaaagactttgtcttcctc
ttaagtgcaaaggctggaggagttggtttaaaccttataggagcctcaaggatccttctc
tatgacatagattggaatcctgcaacagaccttcaagccatggcacgtgtgtggagagat
ggtcagcagaaaaaagtatatatttacaggttgttaatgacaggatctctagatgagaaa
atgtatcagagacaagttagaaagcaaggactgagtggagccgtagttgatgctcgtgac
tccgagcgagttcacttctccactaaagaactcaaggacttgttcacacttcattcaaac
actgcctgcctaacacatgatatgctacagtgctcttgtgatcttacaggcaagaccatt
gcattgccaaaccctgaagaaaatactgaaccagagagatcttgtcaacttggagaccat
ggccagtacagatccagttctaacactacaatggaccagttacagaagtggtatcatagt
gctgcacctttctccccagagattataagtgatccttgcttagaggctgccagtgacttc
ataactttcctctttcatagtgtgtctgacagctcagtgaaggagaggtctgctgttcag
actgaagcttaa
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