Penaeus monodon (black tiger shrimp): 119594306
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Entry
119594306 CDS
T08784
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoo03400
]
119594306
Enzymes [BR:
pmoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
119594306
DNA repair and recombination proteins [BR:
pmoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
119594306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
Helicase_PWI
AAA_22
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
119594306
NCBI-ProteinID:
XP_037799293
LinkDB
All DBs
Position
33:complement(23533774..23562697)
Genome browser
AA seq
2108 aa
AA seq
DB search
MKESGVTWPRIKSQVERLGRENGVNLDCYLREVAEVARQVAPELDTRDEAASLLFTVSHD
HVVLPVKHKLKLHQMFGDVKPYLLERAHKAVRNVADLVGEEELQEMMQNMQNDQETTTMF
GANIKVGKLGPPPELPPMDKLINLQKVKVESKATLRYDDYKPETVQTQVKKKVVKDTYDK
SWVEAEMLKYYTDTSIVSELSSGTIALLISSKGDDELQNEMFELLGFERFELIQTLLQHR
NEIKNPPPDKDIKIAELLSDLEKRGIPERPIFGQQVTVMNETEKQYLKQARKEEKKLLKT
AKQIAEDDSIDDFSPETLKAKREAALLEASQVYLFKKRERVNVPEIRFPYVFDSQNKAKQ
TAGYIAGMKIALPEGFTRAYDDVMEEVDIPMSDPAPPEVGANLINIKELDEIGRIAFKGC
KTLNRIQTVVYPSAYHSNDNLLICAPTGAGKTNIAMLTVVHQIRQHIENDVIQRDKFKVS
LAFIFSSVKYLTLNIDLKFICIRDTQLSQLVKLLIIDEVHLLHGDRGPVLETLVARTLRM
VESQQSMIRIVGLSATLPNYIDVATFLRVNPYKGLFFFDGRFRPVPLGLTFIGVKALGRF
KQMEDMDRITYDKCLHFIKQGHQVMVFVHARNGTLRTAENLIKIAQEMGKTEDFLPDDGP
DVANARKEMARSRNKKLLELFDAGFGVHHAGLLRADRSAVENVFSQGMIKVLVCTATLAW
GVNLPAHAVIIKGTDIYDSKHGTMVDLGILDVLQIFGRAGRPQFDKNGHGTIITTHDKLA
HYLSLLTNQYPIESSFIKHLADXXGFQVSLGNVTNMEEAIEWMSYTYLHVRMRKNPQVYG
LLYKDAQQDPNLEMFRRELLTTAARALDKARMVRFDDATSFMHITDLGRIASQFYIKYDT
VEIFNEFLKSVMNEGDILAVISQSTEFAQLKVRDEEMNELDDLHQQCEVVAMGGAEHVHG
KVNILLQSHISRIRVDSFSLVSDINYITDNSVRITRALFEIVLHRNWPLMAGRLLTMAKM
LEHQMWHFESPMKQFARLTHEIIEKIEDKRLTIEKIRDMDPKEIGKMIRHERMGREIKAA
AWQFPLLEIDSKIQPITRTVLRVTLNINADFTWNDRIHGSQELYWIWVEDPDNNHMYHHE
QFTLTKKQVVRREEQQLVFTIPIFEPLPNQYYVRAISDKWLSCESTCVMNFQNLILPERH
PPHTDLLDLEPLPVTALDNMEFEMLYKFSHFNPIQTQLFHCLYHTDNNVLLGAPTGSGKT
IAAEIAMFRIFREAPEAKIVYIAPLKALVRERVDDWRVRLQERLGRRVVELTGDVSPDIR
AIQAAHVIITTPEKWDGISRSWQTRNYVKQVALIIIDEIHLLGEDRGPVLEVIVSRTNFI
SSHTSKKLRVIGLSTALANAKDLADWLGIGQMGLYNFRPSVRPVPLEVHIAGFPGKHYCP
RMATMNKPTFQAIKQHSPDKPVLVFVSSRRQTRLTAIDLMGFVVVESNPKQWLKMPDHEM
DQILTNIRDENLRLCLSFGIGLHHAGLVERDRKVVEELFVNQKIQILIATSTLAWGVNFP
AHLVVVKGTEYYDGKTKRYVDFPITDVLQMMGRAGRPQFDTQGVAVILVHDQKKHFYKKF
LYEPFPVESSLMGVLPDHMNAEIVAGTISTKQEALDYLTWTYFFRRLVQNPSYYGLELDD
EERANNAINTFLSQTVDRALTCLENAYCIEIGEDNRTIRTTPLGRIASFYYLSHETIQLF
HDKLSAGISMEELLDLMTQAHEYNELPVRHNEDNLNAVLAKSCPIKVNEYTYDSPHTKTH
LLLQAHMSRLKLPCVDYLTDTKSVLDQAIRILQAMLDICGCAGWLAASLQVQVLMQMVTQ
ARWHMDSSLLTLPNVTSDTLYCFKHDGRGIQSLPELVQVVSGQYETLATMLREELDEGQI
ENVFKVIKLLPLLNVNVAVRGWWANTENQSEARVNIRSTEENRKNSDWVEVHADQEYSLA
IHLHRVNRGQDLRIHAPKFPKPKDEGWFLVLGEVESGELLALKRVPPVRGRATHTLSFKT
PDQPGRAVLTLYVMSDSYLGLDQQYDIPLEIIPASLEAQVNSELVISEADEEVLTKWLPP
SSHTPVFK
NT seq
6327 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagagcggagtcacatggcctcgcatcaagagccaggtggagcgtcttgggaga
gagaatggggttaatttagattgttatttgcgagaagtagcagaagtggcacgccaggtt
gccccggagttggacacacgtgacgaggcagcctccctgctcttcactgtctcccacgat
catgtagtactgcctgtgaaacacaaactcaagctgcaccagatgtttggcgatgtgaag
ccttatttgttggagagggctcataaggctgttcgcaatgttgctgatctcgttggtgaa
gaggaactccaggagatgatgcagaatatgcagaatgatcaagagacaactacaatgttt
ggagctaatattaaagttggaaaactaggaccacctcctgaattgccaccaatggataaa
ctgatcaacctacaaaaagttaaagtagaatctaaagcaaccttacgatatgatgattac
aaaccagagacagttcagactcaagtaaagaagaaggtggttaaggatacatacgacaag
tcgtgggtagaagcagagatgctgaaatattacactgacaccagcatagtctcagagcta
agcagtggaaccattgcactcctgattagcagcaagggtgatgatgaactgcagaatgag
atgtttgagttattaggatttgagagatttgaacttatccagacactgctgcaacatcga
aatgagattaaaaacccaccaccagacaaagatataaagattgcagaattgctcagtgac
ttagagaagagaggaatacccgaaagacctatttttggtcagcaagtcactgttatgaat
gaaaccgagaagcagtacctcaagcaggcaaggaaggaggaaaagaagctgctaaagact
gccaaacagatagcagaggatgactcaatagatgactttagtccagagacactaaaagca
aaaagagaagctgctcttttagaagcttcccaggtatatctcttcaagaaacgtgaaaga
gtgaatgtcccagagataagatttccctatgtgtttgattctcagaacaaagccaagcag
acagcaggctacatagcaggcatgaaaatagctttgcctgaaggcttcactagggcttat
gatgatgtaatggaagaagtggatattccaatgtcagatccagctcctccagaagttgga
gctaatctcataaatataaaggagcttgatgagattggaagaatagcatttaaaggttgc
aagacactgaacagaatccagacagtagtttatccatctgcataccacagcaatgacaac
ttacttatatgtgctccaaccggtgctggtaaaaccaacatagctatgttgactgttgta
caccaaattagacagcatattgaaaatgatgttattcagagagataaatttaaggtgagt
ttggccttcatattttcaagtgttaaatatctcactttaaacatagacttgaagttcata
tgcattagagacactcagttgtcacagcttgtaaaattactgattattgatgaagttcac
ctacttcacggtgatcgaggacctgtgctggagactttagttgcgagaacattgcgcatg
gtggaatctcagcagtcaatgatcaggatagttggtctgtctgccacacttccaaattat
attgatgtggcaaccttcctcagagttaatccttacaaagggctattcttctttgatgga
cgtttccggccggtgcctcttggattgaccttcatcggtgtcaaagctcttggaaggttc
aagcagatggaagatatggataggattacctatgacaaatgccttcacttcataaagcaa
ggtcaccaggtgatggtatttgtccatgcaaggaatggaactttgcgaactgctgaaaat
cttatcaagatagcacaagagatgggtaaaacagaagacttcctgcctgatgatggacct
gatgttgccaatgcccgaaaagagatggcacgatcacggaacaaaaagctgttggagttg
tttgacgcaggttttggtgtgcatcatgctgggctgctgcgagctgataggtcagcagtt
gagaatgtttttagccagggaatgatcaaagtgttggtatgtacagctacccttgcctgg
ggtgttaaccttcctgctcatgcagtcatcattaagggaacagacatttatgatagcaaa
catgggaccatggttgacttggggattctagatgtgctgcagatttttggacgtgctggt
agaccgcagttcgataagaatggtcatggaaccatcatcaccacgcatgataaattggct
cattatctgtctttgttaactaatcagtatcctatagagagttcgttcatcaagcatttg
gcagatnnnnatggattccaggtgtcacttggtaatgtcaccaatatggaagaagctatt
gaatggatgagttatacgtacctccatgtccgcatgagaaaaaaccctcaggtgtatgga
ttactgtataaggatgcccagcaggatcctaatcttgaaatgtttcgacgtgagcttctc
accacagctgcgagggcactggataaggctcgtatggttcgatttgatgatgccactagc
tttatgcatattacagatctagggagaattgccagtcagttctacataaagtatgacaca
gttgaaattttcaatgagtttttgaaatctgttatgaatgaaggagacattttagctgtg
atatcacaaagcacagagtttgcacaactaaaggtacgagacgaggagatgaatgaactg
gatgacctccaccagcagtgtgaggtggttgcaatgggaggtgctgaacacgtacatggc
aaagtcaacatccttttgcaatcccacatctcacgcatcagagtagatagtttctcactg
gtgtcagatatcaattatattactgataactctgtgaggataacacgggcactctttgag
atagttctgcacaggaattggcctctgatggcaggtcgtctgcttactatggccaagatg
ttagaacaccagatgtggcattttgagagccctatgaagcagtttgcccgcttgacccat
gagattattgagaagattgaggacaagaggctcaccattgagaagatcagagatatggat
cctaaggaaattggcaagatgatccggcacgaaaggatgggaagggaaattaaagctgct
gcttggcaatttccactacttgagatagactccaaaatccaacccatcacaagaaccgtt
cttagggttacactaaacatcaatgcagatttcacttggaatgacagaattcatgggagt
caggaattgtattggatatgggtagaagatcctgacaacaaccacatgtaccaccatgag
cagttcacactcaccaaaaagcaagttgtacgaagagaggagcagcagttggtcttcact
ataccaatctttgagccactgccaaaccagtactatgtaagagccatcagtgacaagtgg
ctcagctgcgagtctacgtgtgtgatgaatttccagaatctaattctcccagagagacat
cctcctcacactgatttacttgatttagaaccactgccagtgactgcccttgacaacatg
gagtttgaaatgttgtacaagttcagccatttcaaccccatacagacccagcttttccac
tgcttatatcacacagataataatgtattacttggagctcccactggttctggcaaaaca
attgctgctgagatagccatgttcagaatattcagggaagctccagaggcaaagattgtc
tacattgccccactgaaagctcttgtgcgagaacgtgtagatgactggcgcgtaaggctc
caggaaaggcttgggaggagggttgtcgagctgaccggtgatgtgtcaccagatattagg
gccattcaggctgcccatgtgattataactacacctgaaaagtgggatggtatatctcgc
tcatggcagactaggaactatgtcaaacaagtagcgttgattatcatcgatgagattcat
ttactaggggaggatcgtggtccagtccttgaggtgattgtgtcgcgcacaaacttcatt
tccagccatactagtaagaagttgcgtgtcattggcctctctactgctctggccaacgct
aaagacttggcagattggcttggcattgggcagatgggcctgtataatttccgtccatct
gtgagacctgtgccgcttgaagttcacattgcaggttttcctgggaaacattattgccca
cgtatggcaaccatgaataaaccaacattccaagccatcaagcagcattcacctgataag
ccagtgttggtgtttgtctcatcacgtaggcagactaggcttacagccattgacctcatg
ggttttgtggtagttgaatccaatcctaaacagtggttgaagatgccagatcatgagatg
gatcagatattgacaaacattcgcgatgagaaccttcgcctttgcttgtcgtttgggatt
ggtcttcaccatgcgggcctggtagagagagacaggaaggttgttgaggagttgttcgtc
aaccagaaaatccagatcctcattgcaacatccacccttgcttggggagtgaacttccca
gcccatcttgttgtggtcaaggggactgagtactatgatgggaaaacaaagagatatgta
gacttcccaattacagatgtgttgcaaatgatggggcgagcaggtagacctcagtttgac
actcaaggtgttgcggtcattcttgttcatgaccagaagaagcatttctataagaagttc
ctctatgaaccgtttcctgtggagtccagtttgatgggcgtcctgcctgatcacatgaat
gctgagatcgttgctggcaccatttccacaaagcaagaagctttggattacttaacttgg
acttatttctttaggaggcttgtccagaatccatcctactatggactagaactggatgat
gaggagagagcaaataatgccattaacacctttctctctcaaactgtagacagggcattg
acttgtctagaaaatgcatattgcattgaaattggagaggacaaccgcactatcaggacg
acaccacttggccgcatcgcttccttctactacttgtcccacgagacaatccagctcttc
catgataagctcagtgctggcatctctatggaagagcttttggatctgatgacacaggca
catgaatataatgagttgccagttcgtcacaacgaggacaacttgaatgctgtgttagca
aaatcctgtcccatcaaagtgaatgaatacacatatgattctccccatacgaagacccac
ttgctactacaggctcacatgtctagactaaagttaccttgtgtagattacctcactgac
acaaagtctgttttggatcaggctataaggattttacaggctatgttggatatctgtggg
tgtgcaggctggctggctgcttctctacaagtccaagtgttgatgcagatggttactcaa
gcacgctggcacatggacagctcccttctgacactgcccaatgttacttctgacactttg
tattgtttcaaacatgatggaagaggtattcagagtctgccagagcttgtgcaagttgtt
agcgggcagtacgaaacactggcgacaatgctccgagaagaactagatgagggacagatt
gaaaatgtctttaaggtcataaaacttctccctttgctcaatgtcaatgtggctgtgcga
ggttggtgggctaacacagagaatcagtcagaagccagagtcaacatcaggagcacagag
gagaaccgcaagaacagtgactgggtcgaggtccatgcagatcaggaatattccctggcc
atccaccttcaccgtgtgaacaggggtcaagaccttcgcatccatgctcccaagttccca
aagccaaaggatgaaggctggttcttggtcctaggggaggtagagtctggggagttgctg
gcactcaagcgagtgccacctgtccgtggcagagccactcacactctctccttcaagaca
cctgatcaaccaggacgagcagtactgacactttacgtgatgtcagacagctatctaggc
ttggatcagcagtatgacatccctcttgaaatcattcctgccagtcttgaagctcaagtg
aactcagaactagtgataagtgaagcagatgaagaagtactcaccaaatggcttcctccc
tcgtcacacactcctgtttttaaatag
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integrated database retrieval system
