Penaeus monodon (black tiger shrimp): 119594378
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Entry
119594378 CDS
T08784
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
pmoo04141
Protein processing in endoplasmic reticulum
pmoo04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119594378
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119594378
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
119594378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119594378
04131 Membrane trafficking [BR:
pmoo04131
]
119594378
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119594378
Membrane trafficking [BR:
pmoo04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119594378
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
119594378
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
119594378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
MIOS_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
119594378
NCBI-ProteinID:
XP_037799367
EnsemblRapid:
LOC119594378
LinkDB
All DBs
Position
33:31194684..31205468
Genome browser
AA seq
371 aa
AA seq
DB search
METNTRKIWVHLNSRHQSGIYAAVFDRRTDDCHVQATVVVIRSAEKLLWLGHPLYALAKM
VSVISNVETGHDDMIHDAQMDFYGTRLATCSSDRSIKIFEVKGSTQTQIADLREHEGPVW
QVAWAHPMYGNILASCSYDRKVIVWREDGHKWKKIYEYANHDSSVNSVCWAPHEHGLILA
CASSDGSVSILTYTSAHTWENKKITNAHSIGCNAVSWAPAVASGSADGSNRTASAVQRIV
TGGCDTYVKIWRFDSSTGEWAEESKLEGHSDWVRDVAWAPSIGLPRSIIASCSQDRRVII
WMNDGVTGTWQPRELNTFDDVIWHVSWSVTGNILAVSGGDNKVSLWKETLEGQWVCLSDS
AKGHSGTERTL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaacacccgtaaaatatgggtgcatttgaattcgcgacatcaaagcggtatc
tatgcggcagttttcgaccggcgaaccgatgactgccacgtacaggcgacagttgttgtg
attcggtcggcggagaaactactgtggctcggacatcctctttacgccctcgcaaagatg
gtgtctgtcatcagcaatgttgagacaggccatgatgacatgattcacgatgctcagatg
gacttctatgggacccggcttgcaacctgctcctcagacaggtccattaagatctttgag
gtcaagggctccacacagacccagattgctgatctccgagagcatgagggaccagtatgg
caagttgcctgggcccacccaatgtatggtaacatcctagcatcctgcagctatgacaga
aaagttattgtttggcgagaggatggtcacaaatggaaaaagatatacgagtatgccaac
catgactcttcagttaacagcgtgtgctgggctccccatgagcacggactgatccttgcc
tgcgcgtcctctgatggctctgtgtccatcttaacatacacatccgcacacacttgggag
aacaagaaaatcaccaacgcacactctattggttgcaatgcagtgagctgggcgccagct
gtggcttcaggctcagctgacggctccaacagaacagcctcggcagtgcagcgtattgtg
acaggtggctgcgatacctacgtcaaaatttggcgatttgacagcagcacgggagaatgg
gctgaagagagtaagcttgagggtcattcagactgggtgcgtgatgtggcttgggctccc
tccattggcttgccacggtccataattgcctcatgttctcaggaccgccgagtgatcatc
tggatgaatgacggggtcacgggcacttggcagccgcgtgagctcaacacgtttgacgat
gtcatctggcatgtgagctggtctgtcacaggcaacatcttggcggtgtcgggtggggac
aacaaggtgagcctgtggaaggagacgctcgagggccagtgggtatgcctcagcgactcg
gccaagggccactcgggaacggaacgcacactctaa
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