Penaeus monodon (black tiger shrimp): 119594621
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Entry
119594621 CDS
T08784
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119594621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119594621
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119594621
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119594621
Coactivators
SAGA/TFTC/STAGA complex
119594621
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
119594621
STAGA complex
119594621
TFTC complex
119594621
SAGA complex
119594621
SLIK complex
119594621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
119594621
NCBI-ProteinID:
XP_037799601
LinkDB
All DBs
Position
34:complement(17483188..17488766)
Genome browser
AA seq
590 aa
AA seq
DB search
MVDRNDNRNDERRCAQIAVESVITWGEAVGVADLPQETARAIAADVTYRLRQTLHVCGQF
LRHCKRRRLTPDDINRALKWMDAPSILGYTGSEPVEWVSVGEVGVHIPHDPTVNLASTAL
SGHIFHQPGSPCVRGEWAYVSGHTMVKGEAESDTVPAPQQLSAEHTQYYKMLFTIIGGSS
NDLFKLMCEDVATSPGITSLVGPIVGGVVRGAQRARQKPHVLRRILLVIRALLVNPHLHL
GPQNYMRDIINVLVYCIIIERKNAQDTQMIRSLASNVLLQVVSRQPGCRGTWETVVTSLG
GVVASSSCPWGQHIGALTGLLILGAPAILHSLTPIARPYHVRLTHAISQSSITTSRDIHD
AHTTNCLLLAGLVKVMSAFVKCLPDSFVVSPPTKNILHTSVKHSSDEFITPASIGDSDVT
FEQVQEIYKLGEESFGSAFVVQVPGVYLCFCHDHIPSFLNSSVYRDQASTGDALLNPPAT
KKARNITCHSTNKPKPRRSQHVIPSQIFEGYKSLTDRPVNIPMSIRSCGEKSVESLKKKR
NSLPAVIPHPHRALLAHYSSRITGCMPHNTFTRPLHPPLRPGYSLQYLIL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcggaacgataacaggaatgatgaaagacgatgtgcacagatagcagttgaa
agtgttataacatggggtgaagcagtaggtgtcgctgacctcccacaggaaacagcacgt
gcaattgctgctgatgttacatataggttaagacaaacattgcatgtgtgtgggcagttt
cttagacactgcaaacgccgaaggctgaccccagatgatataaatagagctctcaagtgg
atggatgcaccttctatattagggtatacaggcagtgagcctgtggaatgggtcagtgtt
ggagaggttggtgttcacataccacatgaccctactgtgaatttggcgagcactgctctt
agtggacatattttccaccagccagggagtccatgtgtcagaggtgagtgggcttatgtg
agtggccataccatggtgaaaggtgaggcagaaagtgatactgttccagctccacagcag
ctctcagcagaacatacgcagtactataagatgctcttcactatcataggtggatcatca
aatgatctttttaagttgatgtgtgaagatgtagcaacgtcaccaggcataacatcattg
gttggtccaatcgtcggaggagttgtgcgtggtgcgcagcgtgcccggcagaaacctcat
gttcttcgacgtatactgctggtaataagagcactcttagtcaatccacatctacatcta
ggaccacaaaattatatgcgagatatcataaatgtcttggtgtactgtataattattgaa
cgaaaaaatgcacaagatactcagatgatcagaagtttggcttcaaatgtgttactccag
gttgtatcaagacagccagggtgtcgtggaacatgggaaacagtggtgacaagccttgga
ggagtagtagcaagtagcagctgtccttggggtcaacatataggagctcttacaggtctc
ctcatcctaggtgctccagctatattgcacagcctaacaccaattgctcgaccataccat
gtccgcctcactcatgctatctcacaatcctccataacaacatctcgggacattcatgat
gctcatacaacaaattgcctacttctagcaggattagtgaaggttatgtccgcttttgtg
aaatgtcttcctgacagttttgtagtatctccacccacgaagaacatacttcacacttct
gtgaaacacagcagtgatgagtttataactccagccagcataggtgatagtgatgtaact
tttgagcaagtacaggagatatacaagttgggagaagagtcttttggaagtgcctttgtt
gttcaagtacctggtgtttacctttgcttctgccacgatcatattccaagctttcttaat
tcatctgtgtaccgtgaccaagctagcacaggagatgcactccttaacccacctgccaca
aagaaagccagaaatataacctgccactctactaataagccaaagccaagaagaagtcaa
catgtaattccttcccagatatttgaaggttacaagtcactgacagataggccagtaaat
attcccatgagcattcgaagctgtggggaaaaaagtgtggagagccttaagaagaagagg
aattctcttccagcagtaattcctcatccacaccgtgctctcctggctcactacagttct
cgtatcacaggctgcatgcctcacaataccttcacaagacctttacatccgccccttcga
cctggatattctcttcaatatcttatactataa
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