Penaeus monodon (black tiger shrimp): 119595002
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Entry
119595002 CDS
T08784
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
KO
K14961
COMPASS component SWD1
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119595002
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
119595002
COMPASS/SET1 complex (yeast)
119595002
MLL-HCF complex
119595002
MLL3/MLL4 complex
119595002
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
EIF3I
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Frtz
WDR54
Motif
Other DBs
NCBI-GeneID:
119595002
NCBI-ProteinID:
XP_037800062
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Position
35:complement(3695550..3706466)
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AA seq
490 aa
AA seq
DB search
MNLELLESFGQNYPEEFDGALDCASLAGTCAFNRRGTLLAVGCNDGRIVIWDFLTRGIAK
VISAHVHPVCSLSWSRGGYKLLSVSTDNNVCIWDVLSGECDIKYRFPSPVMKAQFHPRND
KIFLVCPMRHPAVLVNVDASHKIVPMDDEGDVNIVASFDRRGEYIYTGNSRGKLLILSCP
DLEVKTTFRIGQGTTSAAAIKSIEFARRTEFFLVNSADRVIRVYDAKKVLRCGKEDDPEP
IQKLQDLVNKTMWKKCCFSGDGEYICAGSARQHSLYIWERSVGNLVKILHGTKGEMLLDV
VWHPVRPILASISSGVVSVWSQNQVENWSAFAPDFKELDENVEYEERESEFDQSDEDKSV
EMSQEKKEEDIEVDVTAIEPVAAFCSSDEEDDSSTLLYLPISPEIEEPEEGWGPEGAPNE
DLNSKRSGDCKENISPKKKRPKTFDVTLENAPTDEVHPLASNRPKDKQMAGNKKGRNNSK
GDSKKDRKKH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgagcttttagagtcgtttggccagaattacccagaggaatttgatggggcc
ctggactgcgcatcactagctggtacctgcgcttttaatagacgaggcactctactggcc
gtggggtgcaatgatggacgaatcgtcatatgggatttcttgacccgcggcattgcgaag
gtcatcagcgctcatgttcatcctgtttgttctttaagctggtcaagaggcggctacaag
cttcttagtgtttctaccgacaataatgtctgcatatgggatgtcctgagtggcgagtgc
gatatcaaatacagatttccctcgcccgttatgaaggcccaatttcatccccgcaatgac
aagattttcctagtttgccccatgagacatccagcggtgctcgtcaatgtcgatgcctcg
cacaagattgttccaatggatgatgagggagacgtcaacattgttgcttcctttgaccgt
cgaggggagtacatatacacaggcaacagccgagggaagctactcatcctctcttgccca
gacttggaggtcaaaacaacattcaggatcggccaagggaccacaagtgctgctgccatc
aagagtattgaatttgcgcgcagaacagagtttttccttgtgaattctgctgaccgtgtt
attcgcgtttatgatgcgaagaaagtccttaggtgtgggaaagaggatgatccagaacca
atacagaagttacaggatttagttaacaaaaccatgtggaagaaatgctgcttctctggc
gatggcgaatatatctgcgcaggctccgctcgacagcactccctgtacatatgggagcgc
agcgtgggaaacctggtgaagatcctgcacggcacaaagggagagatgcttcttgatgtt
gtgtggcatccagtgcgaccaattttggcttccatcagctctggggtagtgtctgtgtgg
tcacagaaccaggttgaaaactggtcagcctttgcccctgacttcaaggagctggacgag
aatgtggaatacgaggagagggaatcagagttcgaccagagcgatgaggacaagagtgtt
gaaatgagccaggagaagaaggaggaggatattgaggtggacgtcacggcgatagaacct
gtagcagccttctgcagctcagacgaggaagacgacagcagcaccctcctgtacctcccc
atctccccggagatcgaagagcccgaggaaggttggggaccagagggggcgcctaatgag
gacctgaacagcaagcgctcgggtgactgcaaggagaatatatccccgaagaagaagaga
cccaagacctttgatgttaccttagagaatgcacccactgacgaagtgcaccccttggca
agcaacagaccgaaagacaagcaaatggcaggcaacaagaagggaagaaataactcaaaa
ggagactctaagaaagatagaaaaaaacattaa
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