Penaeus monodon (black tiger shrimp): 119595193
Help
Entry
119595193 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoo03021
]
119595193
Transcription machinery [BR:
pmoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119595193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
119595193
NCBI-ProteinID:
XP_037800289
LinkDB
All DBs
Position
35:4614959..4682332
Genome browser
AA seq
1945 aa
AA seq
DB search
MSSRLDRLFLLLETGGSGVTRQAAAQQLGEVVRLHPHDLNYLLSRVHVYLSSKSWETRIA
AGLAVEAIVSNIPQWNPQPVKREYVDEEMCKPVAGRLSLGAFNISHVLKKGSYLMAADEK
QFEAEDENIPMDPVERINCQRKLVNQRLGLDVAEVIGVDTQNLFTNEDLADSHQGGITSH
NGQEKDAVVDIIRKEMKSAGLPLSSREMNRARRKAKLLARQKSMDVSECTSDEGPEKKRM
RLASSVTADQAGSDDEERMVVDEGPVGMYPGEEKHGRGGGKATYHTKEQMEQYHQAWLED
MAVRLVCVLALDRFGDFVSDQVVAPVRETCAQALGGILHLLSEGGVFGVLSLLETMLSWK
EWEARHGGLLGLKYLLAVRDDLRSQLLTHAYPHIYKGLVDEMDDVVAVAASCLVPVSDSV
VLLLDRKVVTKLVATLWDSLLDIDDLTSSTNSILLLLSKLLSHLSSDASMQSDLKELAPR
LWPFLYHSSSSVRGSALATLATLTSASHSAKDKGENQEVEAQVDIKQESSSDCYENVTAK
VEEMAMEEHSEAEGSSKTDIKQESTNSHESATAEEKSPEAEENINKDNKMLVDEEKQDDK
KIPLSDDQEIKKDEVXSQNQSIEKGKQKEEEMEKEKEEVKNEPENNQAYVRFPQEETYCG
DYLEWLNPIIQPALTHIYQRALLETSEENIDFVFKIWEQMLARTSLENLLPAVCPMIASW
LCLMMANPKVPLEPTLLLIAHHNKSGEGKRLRVGALNDPAEKAEAKYYLGGCEQYNDPCE
KQSVVVRARCAAARLLGCLSNYVIKPMPGIVYPPEETPVLCYIRLLIAHLSSRSAVQRLA
AGAVVREWASMYANQECHSLLQNALHSCLMEVVYYDEIALSFTRLQQETRDFMAMLRHYK
LPLDEAFINAPVLTLEQIQNLSGHVALTLFNGGRLRPKVHSTLEERRKAIQNNVSQTSTD
QISLSTTTQAIISGAVVRFRILPPKLNPIIKPLMDSIKKEKIEQLQALAAKDLTKLLELC
MDRQTNPNGKVIKNLASFLCVDQEFTPKIPHEESKNTGDANKQKGILSLSSQLKNAERQL
LRRTSSITGRGPGRPPANAKKEDPSEVTEAILDSENQQLAEIQRRGCTTALTHVAQYFGA
ELPTKVPQLWDLMCSPFSVPPQNEVTVKDSQEAVHQLQLLEVVVPTLHPKLVEEFETKLE
LFEHWLYHPYSEVRHMTTRVMGSLATVLTVPVMTYVVEQVVPALTAIDNDNKRQGAVECI
FAVIDRLGFDVVPYIVLLIVPLLGRMSDQDNSVRLMATHCFATLIRLLPLEGGVPDPPSL
SEVLLQQKRREREFLERLLDPSKIENYNVPLPINAELRSYQQSGVNWLFFLNQYRLHGIL
CDDMGLGKTLQSICILAGDHFSKRKEYQKSGQKGSKPLQSLVVCPPTLTGHWVYEVEKFV
KRKYLNPLHYFGPPAERYKLRKFFPDHNLIVASYDIVRNEIDFFSQIKWNYVILDEGHVI
KNGKTKSSKAIKQLVAHHRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFMARYAKPI
LQSRDAKSSSKEQEAGVLAMEALHRQVLPFLLRRVKEDVLKDLPPKITQDYYCDLSPLQQ
QLYEDFARTQANQDINDALRSTDQEKEVGNKPHSHIFQALQYLRKVCNHPKLVLKPQHPE
YERVTAQLKECSSSLSDVTHSAKLPALKQLLLDCGIGAGGGTETEVVVSPHRALIFCQLK
GMLDIIEDDLLKRHLPSVTYLRLDGSVPAGSRHSLVQRFNADPSIDLLLLTTQVGGLGLN
LIGADTVIFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMMT
ANTVISHENSSLLSMATNQLLDLFTLDSGGKAEAQNRGDDTGSTQGLGVGCTGAKAVLEN
LPELWDEDQYQSEYELTAFMQSLKK
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcagattagaccggctgttcctgctgctggagacgggaggctctggcgttaca
cggcaggcagcggcacagcagttgggggaagtggttcgcctgcatccccacgatcttaac
tacctcctgagtcgcgtccatgtgtacctgagctctaagtcatgggaaacaagaatagcc
gcaggtcttgcagttgaggccatagtgagcaacattccgcagtggaatccacagcctgta
aagagagagtatgttgatgaggaaatgtgcaagccagtagcgggccggctatcactgggc
gcttttaacatcagccatgtccttaagaaagggtcatacctcatggctgccgatgagaag
cagtttgaggcagaggatgaaaatattcccatggatcctgtggagcgtattaattgccag
cggaagttagtgaatcagagactcggtctagatgttgcagaagtcattggggttgacact
cagaatctatttacaaatgaagatttagcagactcacatcaaggggggataacctcacac
aatggccaggaaaaagatgcagttgtggatataataagaaaggagatgaaatctgcgggt
ttaccattaagttccagggaaatgaatagggctcggcggaaggccaagttgttagcaaga
cagaagtcgatggatgtgtctgaatgtaccagtgatgagggaccagagaagaaacgcatg
cgtctggcaagttctgtgacagcggatcaagcaggaagcgatgatgaggagaggatggtg
gttgacgaaggacctgtgggaatgtatccaggagaggagaaacatggaagaggtggtggg
aaggctacttatcacactaaagaacaaatggaacagtatcaccaagcctggctagaggac
atggctgtgcgtttggtctgtgtattggctctagaccgctttggtgattttgtctcagat
caagttgtggcgcctgtgagggagacgtgtgcacaagctctgggtggaatcttgcactta
ctctcagaggggggtgtctttggtgtccttagcttgctggaaacaatgttgtcgtggaaa
gaatgggaggctcgccatgggggtttacttggtctcaagtacctcttggctgttcgagat
gacctcaggtcgcagcttctcactcatgcatatccgcatatttacaaaggcttagtggat
gagatggatgacgtggtggctgtggctgcatcttgtctggttcctgtgtctgacagtgtt
gtcttgttgctggaccgaaaagtagttacaaagctggtggctacattgtgggattcgctt
cttgacatagatgacttaacttcctcgaccaactccatattactgcttttatcaaaactt
ctttcccatttaagtagtgatgccagcatgcaaagtgacctgaaggaactggctccaagg
ctttggccatttctttaccactcaagtagttctgtgcgaggatctgcccttgcaacttta
gccactctcacatcagcctcacacagtgcaaaggacaaaggagaaaatcaagaagtggaa
gcacaagttgatattaaacaagaaagctcatcagactgttatgaaaatgtgacagccaaa
gtagaggaaatggcaatggaagaacattcagaggcagaaggaagtagtaaaacagatatt
aaacaagaaagcacaaactctcatgaaagtgcaacagcggaggaaaagtcaccagaggca
gaggaaaatatcaacaaagacaataagatgttggtagacgaggagaaacaagatgacaag
aaaatccctctctcagatgatcaggagatcaaaaaagatgaggtgtagagtcaaaatcag
tcaatagaaaagggaaagcaaaaagaggaggaaatggaaaaagaaaaggaggaagtgaaa
aacgaacctgaaaataatcaagcatatgtcagatttcctcaagaggagacatattgtggg
gattatctggaatggctaaaccccatcatccaaccagctctcactcacatttatcagaga
gcattgttagaaacctcagaagaaaacattgattttgttttcaagatatgggagcagatg
ctggcaaggacgagccttgagaacttgctgccagctgtgtgtcctatgattgcttcttgg
ctctgcctcatgatggccaaccccaaggttccacttgagccaacactattactaattgct
catcataataagtcaggtgaggggaagcgattgcgtgtcggcgccctaaatgatccagca
gaaaaagctgaagccaaatattacctgggtggttgtgaacaatataatgatccttgtgag
aaacaatctgtggttgtgagagccagatgtgctgctgcaagactcctaggttgcctttca
aactatgtgattaagcccatgccagggatagtataccctcccgaggaaactcctgttcta
tgctacattcgccttcttattgcacatctcagctctcgttcggcagtgcagcgactagca
gcaggagctgtggtcagggaatgggcatcaatgtatgccaaccaagagtgccattcactc
cttcagaatgctctacattcatgtctgatggaggttgtctactatgatgaaattgctttg
tcatttacaagactacagcaggaaacacgtgacttcatggctatgctaagacattataag
cttcctttagatgaggccttcataaatgctccagtattaaccttagaacagattcagaat
ctcagtgggcatgtagctttaacattatttaacggaggacgccttagacccaaagttcat
agtacactggaggagagacggaaagctattcaaaataatgtgtcacaaacctcaacagac
cagataagcttatctacgacgactcaggcaataatatctggagctgtagtgagatttcgg
attttaccacccaagctcaacccaattattaagcctctcatggacagcatcaagaaggaa
aagatcgaacaattgcaggctttagcagcaaaggaccttaccaaactgctggagctgtgt
atggaccgacaaaccaacccaaatggcaaagtgatcaagaatcttgcttcttttctctgt
gtagatcaggaatttactcctaaaattcctcatgaggaatccaagaacacaggagatgcc
aataaacaaaaaggaatattgagcttgtcatcacagctaaagaatgcagagcgccagctt
ctcaggcgaacttcatcaattacaggacgtgggccaggaagaccgccggccaatgcaaag
aaagaagaccctagtgaggttaccgaggcaatcttagactcagagaatcaacagctagca
gaaattcagcggaggggatgcacaaccgctctgacacatgttgctcagtattttggcgct
gaactgccaaccaaagttcctcagctatgggatcttatgtgtagtccattcagtgtacct
ccccagaatgaggttactgtgaaggattcacaggaggcagtacaccagctgcagcttcta
gaggttgtggtaccaactctacatcctaagttggttgaggagttcgagacaaagttagag
ctgtttgagcactggctctaccatccatacagtgaagtgcgccacatgacaactcgagtg
atgggctcccttgccactgtgctgactgtgcctgtaatgacctatgtggtggagcaggtt
gtgccagcactgactgccatcgataatgataacaagagacaaggagctgttgaatgcata
tttgctgtcattgatcgtttgggatttgatgttgtgccttacattgttctccttattgtg
cctttattaggtcgtatgagtgaccaagacaatagtgttcgcctcatggccacacattgt
tttgcaactctcatccgattactgcctcttgaggggggtgtgccagaccctcccagtctg
agtgaagtcctcttacagcagaagcgaagagaaagggagttcctcgagagactgcttgat
ccatccaaaattgagaattacaatgttcccttgcctattaatgcagaattgaggtcatac
caacaaagtggagtgaactggctttttttcctgaaccaatacagacttcacggaatcctg
tgtgatgacatgggtcttgggaagactttgcagtcaatctgtattctagcaggtgatcac
ttcagcaaaagaaaggaatatcagaagtcgggccaaaagggaagtaaacccctccagtcc
ctggtggtttgccctccaaccctcacaggtcattgggtctatgaggttgagaagtttgtc
aagaggaaatacttgaatccactacactactttggtcctccagcggagagatacaaacta
aggaagttcttcccagaccacaacctgatagtagcatcttatgacatagtaagaaatgag
attgatttcttctcgcaaattaagtggaattacgtgattctcgatgagggtcatgttata
aaaaatggaaaaacaaagtcttcaaaagccattaagcaacttgtggcccaccatcggctg
attctatcaggcacccccatacaaaacaacgtcctggaactgtggtcactctttgatttc
ttgatgcctggattcttgggcacagaaaggcagtttatggcccgctatgccaaaccaatc
cttcagtcacgggatgctaagagctcaagcaaggagcaagaagcgggggttctggccatg
gaggcacttcacaggcaggttcttcctttcctactgcggcgagtcaaggaagatgttctg
aaagatttgcctcctaagattactcaggattattactgtgatctaagtcctttgcaacaa
cagttgtatgaggactttgctcgtacacaagccaaccaggatataaacgatgcactcaga
agtacagaccaagagaaagaagttggaaacaagcctcatagtcatatattccaggcactc
cagtatttgagaaaagtgtgcaaccacccgaagctggtactaaagccacaacatcctgag
tacgagcgggtaacagcccaactcaaggaatgtagctcttctctgtcagatgtaacacat
tctgcaaaattgccagctctgaaacagttgcttctggattgtggcattggtgctggtgga
ggaacagagactgaagttgttgtgtcaccccatcgggcactcattttctgtcagttgaag
ggcatgttagacataattgaagatgatttactaaagcgacacttgccaagtgtgacgtac
ttgaggcttgatggctcagtccctgcaggatccagacattcccttgtgcagcggttcaat
gccgatccctccatcgatctactgctgctcacaacacaagtgggagggctgggactcaat
ctgataggagcagatactgtaatttttgtagagcatgactggaaccccatgagagatcta
caggccatggatcgtgctcatcgaattggccaaaaacgtgttgtgaacgtttaccgcctt
atcacgagaggaaccctcgaggagaagattatgggattgcagaaatttaagatgatgaca
gcaaacacagtgatcagccatgagaattctagtctgcttagcatggccacaaatcagctg
ctagatctgttcactcttgattctggtggcaaggctgaggcacaaaacagaggtgatgac
acaggtagcactcagggtcttggagttggctgcacaggagcaaaagcagtgctggagaat
ctgccagagctttgggatgaagaccaatatcaaagcgaatatgaactcacagcatttatg
caatcccttaaaaagtaa
DBGET
integrated database retrieval system
