Penaeus monodon (black tiger shrimp): 119595505
Help
Entry
119595505 CDS
T08784
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Pathway
pmoo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119595505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoo03019
]
119595505
03016 Transfer RNA biogenesis [BR:
pmoo03016
]
119595505
03012 Translation factors [BR:
pmoo03012
]
119595505
04131 Membrane trafficking [BR:
pmoo04131
]
119595505
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmoo04147
]
119595505
Messenger RNA biogenesis [BR:
pmoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119595505
Transfer RNA biogenesis [BR:
pmoo03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
119595505
Translation factors [BR:
pmoo03012
]
Eukaryotic type
Elongation factors
119595505
Membrane trafficking [BR:
pmoo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
119595505
Exosome [BR:
pmoo04147
]
Exosomal proteins
Proteins found in most exosomes
119595505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
Gtr1_RagA
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
119595505
NCBI-ProteinID:
XP_037800561
LinkDB
All DBs
Position
3:complement(46599210..46614107)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKTHINIVVVGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKESSEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETNRFYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHVLLCFTLGVKQLIVAVNKMDSTEPKYSEERFKEIHKEVSAYVKK
VGYNPAVVPIIPISGFNGDNMLEKSDNMPWWKKQKISRKSDSYEFETLFDALDNIEPPTR
PLDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVNFAPTGPTTEVKSVEMHHEALT
EAVPGDNVGFNVKNVSVKDLKRGFVASDSKNDPAKEAADFTAQVIVLNHPGQIQAGYSPV
LDCHTAHIACKFAELLTKIDRRTGKELEAGPKHVKSGDSCIVKMVPSKPMCVETFQQYAP
LGRFAVRDMKQTVAVGVIKEVNKKEQSGKTTKAAEKALKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagactcacatcaacatcgtggtggtgggccacgtagactctggcaag
tccaccactaccggtcatctcatctacaaatgcggtggtatcgacaagcgaaccatcgag
aagttcgagaaggagtcctctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaagctgaaggctgagcgtgagcgtggtatcaccatcgacatcgccctgtggaagttc
gagaccaacaggttctacgtgaccatcatcgatgccccaggccatcgtgatttcatcaag
aacatgatcaccggaacctcccaggctgactgcgctgtgctgatcgttgctgccggtact
ggcgagttcgaagctggtatctctaagaacgggcagacccgtgagcacgtgttgctgtgc
ttcaccctgggtgtgaagcagctgatcgtggctgttaacaagatggacagcaccgagccc
aagtactcagaggagcgcttcaaggaaatccacaaggaagtgagcgcctacgtgaagaag
gtcggctacaacccagccgtggtccccatcatccccatctctggcttcaacggcgacaac
atgctcgagaaatccgacaacatgccctggtggaagaagcagaagatctctcgcaagagc
gacagctatgaattcgagaccctgttcgatgctctggacaacatcgagccccccaccaga
cccctggacaaggccctccgtcttcctctccaggacgtatacaagattggtggcattgga
acagtgcccgtgggccgtgtggagactggtatcctgaagccaggtatggttgtcaacttt
gcccccactggccccaccactgaggtcaagtctgtggagatgcaccacgaagctcttacc
gaggctgtccctggtgacaacgttggcttcaacgtgaagaacgtgtctgtaaaggatctg
aagcgtggattcgtcgcttccgactccaagaatgacccagccaaggaagctgctgacttc
accgcccaggtgatcgtccttaaccaccctggccagatccaggctggctactcacctgtg
cttgattgccacactgctcacatcgcctgcaagttcgctgaactgctgaccaagatcgac
aggcgtactggtaaggaactggaagccggacccaagcacgtgaaatctggcgactcctgc
atcgtaaagatggttcccagcaagcccatgtgtgtggagaccttccaacagtatgctcct
cttggacgttttgctgtgcgtgacatgaagcagacggtagctgtgggtgtaatcaaggag
gtcaacaagaaggaacaaagcggtaagactacgaaggctgctgagaaggccctcaagaag
aagtaa
DBGET
integrated database retrieval system
